DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and tspan7

DIOPT Version :9

Sequence 1:NP_001162915.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_999939.1 Gene:tspan7 / 406802 ZFINID:ZDB-GENE-030131-5435 Length:251 Species:Danio rerio


Alignment Length:238 Identity:71/238 - (29%)
Similarity:114/238 - (47%) Gaps:21/238 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFLAGKF-FSIPTFLIVIGSFIIIISFFGCW 74
            :|..|..::|||..||:||:|||.. |.|...:.|.:..:. .:.|..||..|:.|||...|||:
Zfish    17 LKTFLISYSLIFWFTGVILLAVGVW-GKVNLEFDLLVNSEHGTNAPYVLIGTGAVIIIFGLFGCF 80

  Fly    75 GALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNSINPNATTKLW 139
            ...:.:..::..:::.|.::|:.||.|||||::.|::...::|.:  |...|.|.:..:  .:..
Zfish    81 ATCRGSPWMLKLYAMFLVLVFLAELVAGISGFIFRHEIKAVLKGA--YQKAESNYMGKD--DEDL 141

  Fly   140 DDIQDEFECCGVTSYNDW--ITAFPNGDLPISCCNVHVGAVGTFTCNNAQSSVADRHKV------ 196
            |.||...:|||..:|..|  .|.|....:|.|||||      |.:.|...:.:.|..|.      
Zfish   142 DRIQRTLQCCGEENYTSWANTTYFEKEGIPKSCCNV------TASVNCTSAELKDLKKADSVVYH 200

  Fly   197 -GCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREI 238
             ||....|..:.|:...:......||..|..|:..||.::|.|
Zfish   201 QGCFSLMSTTMEANLGIIAGISFGIAFFQVIGIFLACCLSRYI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_001162915.1 Tetraspannin 11..238 CDD:278750 70/236 (30%)
tetraspanin_LEL 106..210 CDD:239401 29/112 (26%)
tspan7NP_999939.1 Tetraspannin 16..243 CDD:278750 70/236 (30%)
TM4SF2_6_like_LEL 112..215 CDD:239414 29/112 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1145558at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
43.780

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