DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and tspan7

DIOPT Version :9

Sequence 1:NP_001162915.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_989350.1 Gene:tspan7 / 394976 XenbaseID:XB-GENE-941774 Length:249 Species:Xenopus tropicalis


Alignment Length:235 Identity:65/235 - (27%)
Similarity:114/235 - (48%) Gaps:15/235 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFLAGKFFSIPTFLIVIGSFIIIISFFGCWG 75
            :|..|..::.:|.|||:||:|||.........|...:|....:.|..||..|:.||:...|||:.
 Frog    15 LKTLLIIYSFVFWITGVILLAVGVWGKLTLGTYISLIAENSTNAPYVLIGTGTTIIVFGLFGCFA 79

  Fly    76 ALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNSINPNATTKLWD 140
            ..:.:..::..:::.|:::|:.||.|||||:|.|::..|....:.|.::..||  ..:..::..|
 Frog    80 TCRGSPWMLKLYAMFLSLVFLAELIAGISGFVFRHEIKDTFLRTYTEAIQNYN--GNDERSQAVD 142

  Fly   141 DIQDEFECCGVTSYNDWITA--FPNGDLPISCCNVHVGAVGTFTCN-----NAQSSVADRHKVGC 198
            |:|....||||..|.:|.|:  :.:...|.|||      ..|..||     |...:....::.||
 Frog   143 DVQRSLRCCGVQYYTNWTTSLYWHDHGFPSSCC------ANTSDCNPQDLRNMTINFTKVNQRGC 201

  Fly   199 LDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREI 238
            .:..:.::..:...:......||..|..|::.||.::|.|
 Frog   202 YELVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCLSRFI 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_001162915.1 Tetraspannin 11..238 CDD:278750 64/233 (27%)
tetraspanin_LEL 106..210 CDD:239401 26/110 (24%)
tspan7NP_989350.1 Tetraspannin 15..237 CDD:366035 63/229 (28%)
TM4SF2_6_like_LEL 110..213 CDD:239414 26/110 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1145558at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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