DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and cd81

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_989271.1 Gene:cd81 / 394885 XenbaseID:XB-GENE-946220 Length:237 Species:Xenopus tropicalis


Alignment Length:264 Identity:68/264 - (25%)
Similarity:115/264 - (43%) Gaps:64/264 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GSANAVKYTLFGFNLIFLITGIILIAVGAGVGAVY------TGYKLF-------LAGKFFSIPTF 57
            |....:||.||.||.||.:.|.:::.|     |::      |...||       ..|.|:.....
 Frog     5 GCTKCIKYLLFVFNFIFWLAGGVILGV-----ALWLRHDPQTSNLLFQQFEDKHAPGTFYIGVYI 64

  Fly    58 LIVIGSFIIIISFFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTY 122
            :|.:|:.::.:.|.||:||::|:.||:.:|...|.|:|..|:||||.|:|.|:..|..::..   
 Frog    65 IIAVGAVMMFVGFLGCYGAIQESQCLLGTFFACLVILFACEVAAGIWGFVNRDQVSKEMRLF--- 126

  Fly   123 SLNEYNSINPNATTKLWDDIQ----------DEFECCGVTSYNDWITAFPNGDLPISCCNVHVGA 177
                |:.:..:|||...:..|          :..:|||..|...::|      :.|         
 Frog   127 ----YSEVYQHATTGTKEQQQKALPVLKAFHETLQCCGDASLKKYVT------MSI--------- 172

  Fly   178 VGTFTCNN-----AQSSVADRH-KVGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAR 236
              |..|..     .|.::.|.| |:..|.....|:      :|.|.||:|::....:||:..:..
 Frog   173 --TDMCPKRSNILEQITIEDCHQKIDVLFSTKLYL------VGIAAVVVAVIMIIEMIFSMVLCC 229

  Fly   237 EIKI 240
            .|:|
 Frog   230 GIRI 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 65/253 (26%)
tetraspanin_LEL 126..201 CDD:351888 18/90 (20%)
cd81NP_989271.1 Tetraspanin 10..229 CDD:459767 65/253 (26%)

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