Protein Alignment Tsp29Fa and rom1b

DIOPT Version :10

• Sequence 1: NP_523515.1
• Gene: Tsp29Fa / 34211
• FlyBaseID: FBgn0032074
• Length: 248
• Species: Drosophila melanogaster
• Sequence 2: NP_957308.2
• Gene: rom1b / 393989
• ZFINID: ZDB-GENE-040426-1073
• Length: 352
• Species: Danio rerio
• Alignment Length: 285
• Identity: 54/285 - (18%)
• Similarity: 96/285 - (33%)
• Gaps: 92/285 - (32%)

  Fly    38 AVYTGYKLFLAGKFFS-----------------IPTFLIVIGSFIIIISFFGCWGALKEN----- 80
            |:::|...|..|.|..                 :|..|:.:|...:.|:.  |.|.:.::
Zfish    27 AMFSGAVTFATGVFLKTELHRRSEVMHSMDIHIVPNLLMAVGLASVGINI--CAGKVCQDSLDPS 89

  Fly    81 ------------YCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNSINPN 133
                        :||.:.|:.:|.:..||       .|.|:....:.:|..|...:..|...:..
Zfish    90 RFPRWKTLLLPFFCLSVFFTSLLLVAMIL-------SYALQPSLEESLKIGLKNGIRFYKDTDTP 147

  Fly   134 A---TTKLWDDIQDEFECCGVTSYNDWITA---------FPNGD-----------------LPIS 169
            .   ..:..|.:|.||:|||.|:|.||...         |.:.:                 :|.|
Zfish   148 GRCFQKETIDRLQIEFQCCGNTNYRDWFEVQWISNRYLDFTSKEVKDRVRSNVDGRYLLDGVPFS 212

  Fly   170 CCNVHVGAVGTFTC-------NNA------QSSVADRHKVGCLDGFSGYISAHAVSLGAAGVVIA 221
            |||    ......|       |||      ||...:.:..||......|......::|...:::.
Zfish   213 CCN----PASPRPCIQYSLLDNNAHYNYEYQSEELNLYNRGCRQALVSYYMGLMNTIGPCVLLVF 273

  Fly   222 ILQFFGVIFACYIAREIKIRNGITG 246
            :||...::...|:...::   |:.|
Zfish   274 LLQMAILVGLRYLQTAME---GVLG 295

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp29Fa	NP_523515.1	Tetraspanin	11..236	CDD:459767	52/273 (19%)
		tetraspanin_LEL	126..201	CDD:351888	26/116 (22%)
rom1b	NP_957308.2	Tetraspanin	16..>167	CDD:459767	27/148 (18%)
		peripherin_like_LEL	120..262	CDD:239415	31/145 (21%)