DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and tspan34b

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_956702.2 Gene:tspan34b / 393380 ZFINID:ZDB-GENE-040426-1362 Length:243 Species:Danio rerio


Alignment Length:237 Identity:73/237 - (30%)
Similarity:112/237 - (47%) Gaps:33/237 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FGF--NLIFLITGIILIAVGA--GVG---AVYTGYKL-FL---------AGKFFSIPTFLIVIGS 63
            |||  .::||..|||.:|.|.  |||   .|..|..| |:         .|:..::...||.:|:
Zfish     4 FGFLKTMMFLFNGIIFLAGGVILGVGIWVKVDNGSILNFMQSLPGASSQMGQVLNVGYLLIALGA 68

  Fly    64 FIIIISFFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIK---TSLTYSLN 125
            .::::.|.||.||:||:.|:::.|.:::.||||.|:|..|.....|..|..|||   .....||.
Zfish    69 VLVVLGFLGCCGAIKESRCMLMLFFIIILIIFIAEVAGAIVILAFRPLAETLIKQLGVDAVKSLQ 133

  Fly   126 EYNSINPNATTKLWDDIQDEFECCGVTSYNDWITAF---PNGDLPISCCNVHVGAVGTFTCNNAQ 187
            .....||: .|.||:......:|||..:|.|:..:|   ...:.|:.|||       |..||  |
Zfish   134 SDFGKNPD-VTGLWNTTMTGMKCCGFNNYTDFTNSFFVNSTKNYPVQCCN-------TSPCN--Q 188

  Fly   188 SSVADRHKVGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVI 229
            ::|.:....||.......:..:||.:.|..:.||.|:...:|
Zfish   189 AAVMNSTVTGCFPALIKLVDKNAVIIIAVALGIAALELAAMI 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 73/237 (31%)
tetraspanin_LEL 126..201 CDD:351888 22/77 (29%)
tspan34bNP_956702.2 Tetraspanin 7..237 CDD:459767 70/234 (30%)
tetraspanin_LEL <139..211 CDD:351888 22/81 (27%)

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