DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and tspan31

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_956575.1 Gene:tspan31 / 393251 ZFINID:ZDB-GENE-040426-1123 Length:212 Species:Danio rerio


Alignment Length:259 Identity:48/259 - (18%)
Similarity:94/259 - (36%) Gaps:78/259 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLTGSANAVKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFLAGKFFSIPTFL------IVI 61
            ::.|.....|..|...|:::::.|::||.|.|.             ||.|.|.:.:      |.:
Zfish     1 MVCGGFTCSKNALCSLNVVYMLVGLLLIVVAAW-------------GKGFGIVSSIHIIGGVIAV 52

  Fly    62 GSFIIIISFFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASD-LIKTSLTYSLN 125
            |.|:.:|:..|..||:..:..::..:.|:|.::|:.:.....|...:.....: |:::|.....|
Zfish    53 GFFLQLIAIVGLIGAVHHHQVMLFFYMVILFVVFLFQFGVSCSCLAMNQGQQEKLLESSWKIMSN 117

  Fly   126 EYNSINPNATTKLWDDIQDEFECCGVTSYNDWITAFPNGDLPISCCNVHVGAVGTFTCNNAQSSV 190
            :         |::  .::.:.:|||:                             |...|.|:.:
Zfish   118 D---------TRI--SLEKKLDCCGL-----------------------------FNSTNLQADI 142

  Fly   191 -ADRHK-----------VGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREIKIRN 242
             :|.|.           |.|......|.|.....||..|:..:..:..||..|      ::.||
Zfish   143 MSDLHLCTSPCTQKKECVTCGPKMLQYSSEALKILGGVGLFFSFTEILGVWLA------MRYRN 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 45/243 (19%)
tetraspanin_LEL 126..201 CDD:351888 11/86 (13%)
tspan31NP_956575.1 Tetraspanin 9..198 CDD:459767 45/247 (18%)

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