DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and tspan2a

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001018160.1 Gene:tspan2a / 378854 ZFINID:ZDB-GENE-050522-511 Length:211 Species:Danio rerio


Alignment Length:262 Identity:72/262 - (27%)
Similarity:111/262 - (42%) Gaps:76/262 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLLTGSANAVKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFL--------------AGKF 51
            ||.:.|....|||.||.||.||.::|.:::|||           |:|              |.:.
Zfish     1 MSEVQGCMKCVKYLLFVFNFIFWLSGSLVLAVG-----------LWLRFDPDTTSLLSENDAPEN 54

  Fly    52 FSIPTFLIV-IGSFIIIISFFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDL 115
            |.|..:::: .|..::|:.||||:||::|:.||:.||...|.:||..|:|||:.|::   :...:
Zfish    55 FFIAVYILIGAGGIMMIVGFFGCFGAVRESQCLLGSFFACLLLIFGAEVAAGVFGFL---NKDQI 116

  Fly   116 IKTSLTYSLNEYNSINPNATTKLWDDIQDEFECCGVTSYNDWITAFPNGDLPISCCNVHVGAVGT 180
            ||....|..:.....|....|..:..:.|   |||..|            .||..|     ..|.
Zfish   117 IKEVQNYYESATKMENGTVITSAFHSVLD---CCGTES------------SPIETC-----TEGN 161

  Fly   181 FTCNNAQSSVADRHKVGCLDGF-------SGYISAHAVSLGAAGVVIAILQFFGVIFACYI--AR 236
            ..|            |..::.|       .||     |.:|.|||:: |...|.::..|.|  :|
Zfish   162 KDC------------VQAIEDFFNEKLFIIGY-----VGIGIAGVMV-IGMIFSMVLCCAIRNSR 208

  Fly   237 EI 238
            |:
Zfish   209 EV 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 67/248 (27%)
tetraspanin_LEL 126..201 CDD:351888 13/74 (18%)
tspan2aNP_001018160.1 Tetraspanin 11..202 CDD:459767 65/242 (27%)

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