DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and Tspan31

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001008379.1 Gene:Tspan31 / 362890 RGDID:1309876 Length:210 Species:Rattus norvegicus


Alignment Length:237 Identity:53/237 - (22%)
Similarity:101/237 - (42%) Gaps:54/237 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KYTLFGFNLIFLITGIILIAV---GAGVGAVYTGYKLFLAGKFFSIPTFLIVIGSFIIIISFFGC 73
            |..|...|:::::.|::||.|   |.|:|.|.:   :.:.|.       :|.:|.|:::|:..|.
  Rat    10 KNALCALNVVYMLVGLLLIGVAAWGKGLGVVSS---IHIIGG-------VIAVGVFLLLIAVAGL 64

  Fly    74 WGALKENYCLVLSFSVMLAIIFILELAAGISGYVL---RNDASDLIKTSLTYSLNEYNSINPNAT 135
            .||:..:..|:..:.::|.::||.:.  |||...|   ||..:|:|..|..        :..|:|
  Rat    65 VGAVNHHQVLLFFYMIILGLVFIFQF--GISCSCLAINRNTQADVINASWW--------VLSNST 119

  Fly   136 TKLWDDIQDEFECCGVTSYNDWITAFPNGDLPISCCNVHVGAVGTFTCNNAQSSVADRHKVGCLD 200
            .   .:::..|:|||:  :|            ::..::|..|..:..|....|...     .|.:
  Rat   120 R---HELERSFDCCGL--FN------------LTTVHLHDDASCSALCKTRSSPCQ-----MCGE 162

  Fly   201 GFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREIKIRN 242
            .|..:.......||..|:..:..:..||..|      ::.||
  Rat   163 TFLKHSDKALKILGGVGLFFSFTEILGVWLA------MRFRN 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 51/229 (22%)
tetraspanin_LEL 126..201 CDD:351888 12/74 (16%)
Tspan31NP_001008379.1 Tetraspanin 9..196 CDD:459767 51/233 (22%)

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