DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and Tsp42Ek

DIOPT Version :9

Sequence 1:NP_001162915.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001246161.1 Gene:Tsp42Ek / 35621 FlyBaseID:FBgn0033133 Length:215 Species:Drosophila melanogaster


Alignment Length:244 Identity:55/244 - (22%)
Similarity:93/244 - (38%) Gaps:44/244 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SANAVKYTLFGFNLIFLITGIILIAVGA-GVGAVYTGYKLFLAGKFFSIPTFLIVIGSFIIIISF 70
            ::..||..|...|.:..::|:.|||:.. .:......|.|||.|           :|..|.:.:.
  Fly     4 TSGCVKCFLNTLNTLNALSGLSLIAIATLALSKAPIAYILFLYG-----------LGGIIFVSAV 57

  Fly    71 FGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNSINPNAT 135
            .||.|...||.|:..::..:|....|:.| .||..:....:..:...........:...:.|.| 
  Fly    58 LGCCGICMENVCMTATYGFLLLAQLIISL-LGIFRFKFTEEYIEKFAAEEVQMKWDEELVEPGA- 120

  Fly   136 TKLWDDIQDEFECCGVTSYNDWITAFPNGDLPISCCNVHVGAVGTFTCNNAQSSVADRHKVGCLD 200
               .|..|..:||||..|.:|:: |.....||.||          :...:.|   ...:..||:.
  Fly   121 ---MDIYQTVYECCGRDSPDDYV-AIGRQTLPPSC----------YPQEDPQ---MPHYLAGCVQ 168

  Fly   201 GFSG-----YISAHAVSLGAAGVVIAILQFFGVIFACYIA---REIKIR 241
            ..|.     :..||..:..|.|:.|.::     |.|.|:.   |:.::|
  Fly   169 KSSENFVVLFSYAHDTNWIALGITILMM-----IAAFYLVGRFRKQRVR 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_001162915.1 Tetraspannin 11..238 CDD:278750 54/235 (23%)
tetraspanin_LEL 106..210 CDD:239401 20/108 (19%)
Tsp42EkNP_001246161.1 Tetraspannin 7..202 CDD:278750 52/229 (23%)
tetraspanin_LEL 94..174 CDD:239401 19/97 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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