DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and Tsp42Ej

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_523636.1 Gene:Tsp42Ej / 35620 FlyBaseID:FBgn0033132 Length:227 Species:Drosophila melanogaster


Alignment Length:257 Identity:56/257 - (21%)
Similarity:89/257 - (34%) Gaps:84/257 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KYTLFGFNLIFLITGIILIAVGA---GVGAVYTGYKLFLAGKFFSIPTFLIVIGSFIIIISFFGC 73
            ||.|       |:|.|:::....   ..|....|..:.:.|.:.|     .:.|..:..::|.|.
  Fly    11 KYGL-------LVTCILIVTCNVFFFSCGVTTWGSAVSVYGSYGS-----ALCGGAVFGVAFLGM 63

  Fly    74 WGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDA-------------SDLIKTSLTYSLN 125
            :.|||.:|    .:|:...|...|.:|| :..|:....|             .||.:.. |:|  
  Fly    64 YVALKVSY----KYSIYYLICSGLVIAA-LGSYLFTFTAMREQLMGRFEERMRDLFERK-THS-- 120

  Fly   126 EYNSINPNATTKLWDD----IQDEFECCGVTSYNDWITAFPNGDLPISCCNVHVGAVGTFTCNNA 186
                          ||    :...|.|||:....|::.. .:|.||.|||.       .|.|   
  Fly   121 --------------DDKMQPVHSLFGCCGIEGPQDYLQE-EHGALPSSCCY-------AFDC--- 160

  Fly   187 QSSVADRHKVGC---------LDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREIK 239
             |..|..::.||         :.....|.|..|         |..|:|.|:..|.::.:..|
  Fly   161 -SKPAHVYEEGCSTKAVATLRMQAELNYYSCMA---------IIALEFLGLFTAYHLGKARK 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 55/252 (22%)
tetraspanin_LEL 126..201 CDD:351888 19/87 (22%)
Tsp42EjNP_523636.1 Tetraspanin 11..>135 CDD:459767 32/157 (20%)
tetraspanin_LEL 97..183 CDD:239401 24/114 (21%)

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