DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and Tsp42Eh

DIOPT Version :9

Sequence 1:NP_001162915.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_523634.1 Gene:Tsp42Eh / 35617 FlyBaseID:FBgn0033129 Length:231 Species:Drosophila melanogaster


Alignment Length:194 Identity:42/194 - (21%)
Similarity:76/194 - (39%) Gaps:43/194 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 IVIGSFIIIISFFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYS 123
            :::|:.|::.|.||.....|::..|::.::|:|..:.|:::......|..   :.|.:..||...
  Fly    58 VLLGTVIVVASIFGSVAVAKDSRVLLICYAVLLVFLLIVQIVLVSISYAA---SRDFLPDSLRQG 119

  Fly   124 LNEYNSINPNATTKLWDDIQDE-----------FECCGVTSYNDW--ITAFPNGDLPISCCNVHV 175
            |::           || |:|.|           ..|||..|..|:  :...|    |.|||    
  Fly   120 LDD-----------LW-DLQHEGNSTLNTYEEWLHCCGRNSAEDYLHLEKMP----PPSCC---- 164

  Fly   176 GAVGTFTCNNAQSSVADRHKVGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREIK 239
                   .|...:...:....||...|..|:.|...:..:....:.|.:|.|.:..||:...|:
  Fly   165 -------LNRDCTKHLNLFMTGCEVKFKEYVGAKTANFHSLSWFLVIFEFAGSVTTCYLVDSIR 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_001162915.1 Tetraspannin 11..238 CDD:278750 41/191 (21%)
tetraspanin_LEL 106..210 CDD:239401 26/116 (22%)
Tsp42EhNP_523634.1 Tetraspannin 8..220 CDD:278750 41/191 (21%)
tetraspanin_LEL 109..192 CDD:239401 25/109 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443022
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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