DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and Tsp42Ef

DIOPT Version :9

Sequence 1:NP_001162915.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_523632.2 Gene:Tsp42Ef / 35615 FlyBaseID:FBgn0033127 Length:220 Species:Drosophila melanogaster


Alignment Length:257 Identity:50/257 - (19%)
Similarity:93/257 - (36%) Gaps:71/257 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SANAVKYTLFGFNLIFLITGIILIAVGAGVGAVYT----------GYKLFLAGKFFSIPTFLIVI 61
            |.::||..::..:::..:..::||:.|..|...|.          ||               :.:
  Fly     3 STSSVKLIVYALDVLCTLLALVLISFGIYVAVSYNLNEIGQLTAYGY---------------VGL 52

  Fly    62 GSFIIIISFFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVL----RNDASDLIKTSLTY 122
            |:..:::..:|...|.:||.|..::|.:.|.::.|.:.|.   .|:|    :..||:|       
  Fly    53 GAAALLVVLWGYLSAWRENVCCTVTFIIFLCLVIIAQFAV---VYLLITQEKTVASNL------- 107

  Fly   123 SLNEYNSINPNATTKLWDD----------IQDEFECCGVTSYNDWITAFPNGDLPISCCNVHVGA 177
                     .||....|::          .|:.|:|||..|..|:|.   |..||...|      
  Fly   108 ---------ANALEATWEEELNSPGAMSLYQNWFQCCGRGSPQDYIV---NERLPPETC------ 154

  Fly   178 VGTFTCNNAQSSVADRHKVGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREIK 239
               |. |:.:|...:....||...|..|............:|:...:....:.:|.:...|:
  Fly   155 ---FR-NHDKSKPENLIHTGCRVEFENYWQHLTKIFNILALVLIGFELLLSVISCRLCNSIR 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_001162915.1 Tetraspannin 11..238 CDD:278750 48/250 (19%)
tetraspanin_LEL 106..210 CDD:239401 27/117 (23%)
Tsp42EfNP_523632.2 Tetraspannin 7..211 CDD:278750 48/250 (19%)
tetraspanin_LEL 103..181 CDD:239401 25/106 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449967
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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