DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and cd63

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_955837.1 Gene:cd63 / 321461 ZFINID:ZDB-GENE-030131-180 Length:237 Species:Danio rerio


Alignment Length:240 Identity:84/240 - (35%)
Similarity:123/240 - (51%) Gaps:19/240 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GSANAVKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFLAGKFFSIPTFLIVIGSFIIIISF 70
            |.|..|||.||.||.||.:.|:.||.:|..| .|.......|.|...| |..|||:|..|..|||
Zfish     5 GGAKCVKYLLFFFNFIFWLCGLALIVLGILV-HVSLHNTAILQGASGS-PMVLIVVGVIIFFISF 67

  Fly    71 FGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNSINPNAT 135
            |||.||.|||.|:|::|:::|::|.|.|:.|||:||:.|...::|:..|....:..||......|
Zfish    68 FGCCGAWKENQCMVVTFAIILSLIVITEIGAGIAGYIFRGKVNELLDQSFNTMIAGYNKTEEYRT 132

  Fly   136 TKLWDDIQDEFECCGVTSYNDWIT-AFPNGDLPISCC-----NVHVGAVGTFTCNNAQSSVADRH 194
            |  .|.||.:.:|||..|.:||:. :..:..:|.|||     |..:||:...|....:       
Zfish   133 T--LDSIQKQLKCCGGNSSSDWVNFSADHISVPDSCCKNVTKNCGIGAMTKPTVIYLE------- 188

  Fly   195 KVGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREIK 239
              ||.......|..:.:.:....:||..:|..|::.||.::|.|:
Zfish   189 --GCQPILETRIKENILWIAVGALVIGFVQITGIVLACILSRAIR 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 80/230 (35%)
tetraspanin_LEL 126..201 CDD:351888 23/80 (29%)
cd63NP_955837.1 Tetraspanin 10..228 CDD:459767 80/230 (35%)
CD63_LEL 103..202 CDD:239419 28/109 (26%)

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