DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and cd63

DIOPT Version :9

Sequence 1:NP_001162915.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_955837.1 Gene:cd63 / 321461 ZFINID:ZDB-GENE-030131-180 Length:237 Species:Danio rerio


Alignment Length:240 Identity:84/240 - (35%)
Similarity:123/240 - (51%) Gaps:19/240 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GSANAVKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFLAGKFFSIPTFLIVIGSFIIIISF 70
            |.|..|||.||.||.||.:.|:.||.:|..| .|.......|.|...| |..|||:|..|..|||
Zfish     5 GGAKCVKYLLFFFNFIFWLCGLALIVLGILV-HVSLHNTAILQGASGS-PMVLIVVGVIIFFISF 67

  Fly    71 FGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNSINPNAT 135
            |||.||.|||.|:|::|:::|::|.|.|:.|||:||:.|...::|:..|....:..||......|
Zfish    68 FGCCGAWKENQCMVVTFAIILSLIVITEIGAGIAGYIFRGKVNELLDQSFNTMIAGYNKTEEYRT 132

  Fly   136 TKLWDDIQDEFECCGVTSYNDWIT-AFPNGDLPISCC-----NVHVGAVGTFTCNNAQSSVADRH 194
            |  .|.||.:.:|||..|.:||:. :..:..:|.|||     |..:||:...|....:       
Zfish   133 T--LDSIQKQLKCCGGNSSSDWVNFSADHISVPDSCCKNVTKNCGIGAMTKPTVIYLE------- 188

  Fly   195 KVGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREIK 239
              ||.......|..:.:.:....:||..:|..|::.||.::|.|:
Zfish   189 --GCQPILETRIKENILWIAVGALVIGFVQITGIVLACILSRAIR 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_001162915.1 Tetraspannin 11..238 CDD:278750 81/232 (35%)
tetraspanin_LEL 106..210 CDD:239401 28/109 (26%)
cd63NP_955837.1 Tetraspannin 9..230 CDD:278750 81/233 (35%)
CD63_LEL 103..202 CDD:239419 28/109 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 133 1.000 Domainoid score I5027
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37526
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005733
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_106877
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4418
SonicParanoid 1 1.000 - - X3621
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.700

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