DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and Tsp5D

DIOPT Version :9

Sequence 1:NP_001162915.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001259266.1 Gene:Tsp5D / 31540 FlyBaseID:FBgn0029837 Length:287 Species:Drosophila melanogaster


Alignment Length:260 Identity:68/260 - (26%)
Similarity:115/260 - (44%) Gaps:30/260 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GSA--NAVKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFL---AGKFFSIPTFLIVIGSFI 65
            |:|  ..::.|....|:|..:.....:..|..:...|.||...|   ||  .|..|..:.||...
  Fly     2 GNAGYTCIRRTFCWLNIILWLCSCAFLGAGLWLRLSYAGYATLLPQHAG--LSADTIFMGIGGTG 64

  Fly    66 IIISFFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSL-NEYNS 129
            .::|||||.||..::.||::.:.:::.::|:.|...|...::.|......:...|.:.: ..|||
  Fly    65 FVVSFFGCCGAWVQSRCLLVLYFMLIVMLFMSEFLVGSIAFLFRGGLGRTLANELRFGIERHYNS 129

  Fly   130 ------INPNATTKLWDDIQDEFECCGVTSYNDW--ITAFPNGD-LPISCCNVHVGAVGTFT--- 182
                  :.|:..: :||.:|..||||||:||.||  |.::|... :|.|||..........|   
  Fly   130 SDRGSLVAPSVAS-IWDSVQQSFECCGVSSYEDWYDIQSWPGRRWVPESCCRTLYDQRQVLTEGS 193

  Fly   183 --------CNNAQSSVADRHKVGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREIK 239
                    |..:::......| ||......:.:.....:||.|:.||.:|.||:|.:..:...:|
  Fly   194 GDGMMRPDCGRSENPSLWWDK-GCAHSLQSWFTGQLNVVGAVGLGIAFVQLFGLITSMLLFCTVK 257

  Fly   240  239
              Fly   258  257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_001162915.1 Tetraspannin 11..238 CDD:278750 65/250 (26%)
tetraspanin_LEL 106..210 CDD:239401 30/124 (24%)
Tsp5DNP_001259266.1 Tetraspannin 8..256 CDD:278750 65/251 (26%)
NET-5_like_LEL 105..228 CDD:239418 30/124 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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