Protein Alignment Tsp29Fa and Tspan18

DIOPT Version :10

• Sequence 1: NP_523515.1
• Gene: Tsp29Fa / 34211
• FlyBaseID: FBgn0032074
• Length: 248
• Species: Drosophila melanogaster
• Sequence 2: NP_001101220.1
• Gene: Tspan18 / 311210
• RGDID: 1560411
• Length: 248
• Species: Rattus norvegicus
• Alignment Length: 255
• Identity: 64/255 - (25%)
• Similarity: 112/255 - (43%)
• Gaps: 37/255 - (14%)

  Fly     9 NAVKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYK-------LFLAGKFFSIPTFLIVIGSFII 66
            :.:||.:|.||....:.|..|:.||..|....||::       |...|.:     .::.:|..:.
  Rat     7 SCMKYLMFVFNFFVFLGGACLLGVGIWVLVDPTGFREIVATNPLLTTGAY-----VVLAMGGLLF 66

  Fly    67 IISFFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDAS-DLIKTSLTYSLNEYNSI 130
            ::.|.||.||::||.||:|.|.:.:.|||::||:|.|..::.|...: :.....||......|..
  Rat    67 LLGFLGCCGAVRENRCLLLFFFLFILIIFLVELSAAILAFIFREHLTREFFTKELTKHYQGDNDT 131

  Fly   131 NPNATTKLWDDIQDEFECCGVTSYNDW-------ITAFPNGDLPISCC----NVHVGAV-GTFTC 183
            :..:.|  |:.:...|.||||....|:       :......::|.:||    ....|.| ....|
  Rat   132 DVFSAT--WNSVMITFGCCGVNGPEDFKLASVFRLLTLDTEEVPKACCRREPQTRDGVVLSREEC 194

  Fly   184 NNAQSSVADRHKVGC----LDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREIK 239
            ...::...  :|.||    |:.|..|:    ...||..:.:..::.|.::||..:.|.|:
  Rat   195 QLGRNPFI--NKQGCYTVILNTFETYV----YLAGAFAIGVLAIELFLMVFAMCLFRGIQ 248

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp29Fa	NP_523515.1	Tetraspanin	11..236	CDD:459767	62/248 (25%)
		tetraspanin_LEL	126..201	CDD:351888	19/90 (21%)
Tspan18	NP_001101220.1	Tetraspanin	10..245	CDD:459767	62/247 (25%)
		uroplakin_I_like_LEL	105..218	CDD:239409	23/116 (20%)