Protein Alignment Tsp29Fa and Tspan17

DIOPT Version :10

• Sequence 1: NP_523515.1
• Gene: Tsp29Fa / 34211
• FlyBaseID: FBgn0032074
• Length: 248
• Species: Drosophila melanogaster
• Sequence 2: XP_006253692.1
• Gene: Tspan17 / 306771
• RGDID: 1311167
• Length: 281
• Species: Rattus norvegicus
• Alignment Length: 266
• Identity: 83/266 - (31%)
• Similarity: 119/266 - (44%)
• Gaps: 57/266 - (21%)

  Fly    12 KYTLFGFNLIFLITGIILIAVG------AGVGAVYTGYKLFLAGKFFSIPTFL-IVIGSFIIIIS 69
            ||.|||||::|.:.|.:.:|:|      .||.:..:|. ..|.|   ..|.:| :|||..:.::.
  Rat    18 KYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISGL-TDLGG---LDPVWLFVVIGGIMSVLG 78

  Fly    70 FFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNSINPNA 134
            |.||.|||:||..|:..|||.|.:||.|||||||..:|.:    |.|:..|...:|       |.
  Rat    79 FAGCIGALRENTFLLKFFSVFLGLIFFLELAAGILAFVFK----DWIRDQLNLFIN-------NN 132

  Fly   135 TTKLWDDI---------QDEFECCGVTSYNDW-ITAFPN-GDL---------PISCCNVHVGAVG 179
            .....|||         |:.:.|||....||| :..:.| .||         |.||| |...|..
  Rat   133 VKAYRDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDLNPSRERCGVPFSCC-VRDPAED 196

  Fly   180 TFTCNNAQSSVADRHKV-----------GCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACY 233
            ..   |.|.....|.|:           ||:..|..::..:.:.:....|.||:||..|:..|..
  Rat   197 VL---NTQCGYDIRLKLELEQQGSIYTKGCVGQFEKWLQDNLIVVAGVLVAIALLQICGICLAQN 258

  Fly   234 IAREIK 239
            :..:|:
  Rat   259 LVSDIE 264

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp29Fa	NP_523515.1	Tetraspanin	11..236	CDD:459767	82/261 (31%)
		tetraspanin_LEL	126..201	CDD:351888	26/105 (25%)
Tspan17	XP_006253692.1	Tetraspanin	18..260	CDD:459767	82/260 (32%)
		TM4SF9_like_LEL	115..235	CDD:239412	32/134 (24%)