Protein Alignment Tsp29Fa and Upk1b

DIOPT Version :10

• Sequence 1: NP_523515.1
• Gene: Tsp29Fa / 34211
• FlyBaseID: FBgn0032074
• Length: 248
• Species: Drosophila melanogaster
• Sequence 2: NP_001019424.1
• Gene: Upk1b / 303924
• RGDID: 1307806
• Length: 260
• Species: Rattus norvegicus
• Alignment Length: 255
• Identity: 62/255 - (24%)
• Similarity: 99/255 - (38%)
• Gaps: 60/255 - (23%)

  Fly    20 LIF--LITGIILIAVGAG----VGAVYTGYKLFLA---GKFFSIPTFLIVIGSFIIIISFFGCWG 75
            |||  :|.|:..||:.|.    |...::.|.|..|   ...|......:.:|..:..:|.....|
  Rat    15 LIFGHVIVGMCGIALTAECIFFVSDQHSLYPLLEATNNDDIFGAAWIGMFVGICLFCLSVLAIVG 79

  Fly    76 ALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTS--LTYSLNEYNSINP------ 132
            .:|.|..::|::.:|:.|::..|:|:.|:....|    |...|:  |...|..|.:.:|
  Rat    80 IMKSNRKILLAYFIMMFIVYGFEVASCITAATQR----DFFTTNLFLKQMLMRYQNNSPPTNDDK 140

  Fly   133 ---NATTKLWDDIQDEFECCGVTSYNDW---ITAF--PNGDL----PISCCNV------------ 173
               :..||.||.:..:..||||...:||   .:||  .|.|.    |..||.:
  Rat   141 WKNSYVTKTWDRLMLQDHCCGVNGPSDWQKYTSAFRVENSDADYPWPRQCCVMDKLQEPLNLDAC 205

  Fly   174 HVGAVGTFTCNNAQSSVADRHKVGCLDGFSGYISAHAVSLGAAGVVIAILQFF---GVIF 230
            .:|..|.:            |..||.:..||.:..||..:...|..|....|:   |.:|
  Rat   206 KLGVPGYY------------HSQGCYELISGPMDRHAWGVAWFGFAILCWTFWVLLGTMF 253

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp29Fa	NP_523515.1	Tetraspanin	11..236	CDD:459767	62/255 (24%)
		tetraspanin_LEL	126..201	CDD:351888	24/104 (23%)
Upk1b	NP_001019424.1	Tetraspanin	14..>161	CDD:459767	36/149 (24%)
		uroplakin_I_like_LEL	120..230	CDD:239409	28/121 (23%)