DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and Cd63

DIOPT Version :9

Sequence 1:NP_001162915.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_008763246.1 Gene:Cd63 / 29186 RGDID:62080 Length:262 Species:Rattus norvegicus


Alignment Length:246 Identity:77/246 - (31%)
Similarity:132/246 - (53%) Gaps:30/246 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GSANAVKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFL-----AGKFFSIPTFLIVIGSFI 65
            |....||:.|:...|.|....:.|||:|..|..|   .|..:     ||..  :|..:|.:|:|:
  Rat    29 GGMKCVKFLLYVLLLAFCACAVGLIAIGVAVQVV---LKQAITHETTAGSL--LPVVIIAVGAFL 88

  Fly    66 IIISFFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNE--YN 128
            .:::|.||.||.||||||:::|::.|::|.::|:|..|:|||.|    |.:|:..:.|..:  .|
  Rat    89 FLVAFVGCCGACKENYCLMITFAIFLSLIMLVEVAVAIAGYVFR----DQVKSEFSKSFQKQMQN 149

  Fly   129 SINPNATTKLWDDIQDEFECCGVTSYNDW--ITAFPNGDLPISCC-NVHVGAVGTFTCNN--AQS 188
            .:..|.|..:.|.:|.|.:|||.::|.||  |.......:|.||| |:.||      |.|  .:|
  Rat   150 YLTDNKTATILDKLQKENKCCGASNYTDWERIPGMAKDRVPDSCCINITVG------CGNDFKES 208

  Fly   189 SVADRHKVGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREIK 239
            ::   |..||::..:.::..:.:.:..|.:.||.::..|:||:|.:.:.|:
  Rat   209 TI---HTQGCVETIAAWLRKNVLLVAGAALGIAFVEVLGIIFSCCLVKSIR 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_001162915.1 Tetraspannin 11..238 CDD:278750 75/238 (32%)
tetraspanin_LEL 106..210 CDD:239401 32/110 (29%)
Cd63XP_008763246.1 Tetraspannin 33..255 CDD:278750 75/239 (31%)
ATP-synt_A <72..131 CDD:294288 25/60 (42%)
CD63_LEL 129..227 CDD:239419 32/110 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 129 1.000 Domainoid score I5128
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37526
Inparanoid 1 1.050 133 1.000 Inparanoid score I4505
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005733
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_106877
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3621
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.760

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