DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and TSPAN13

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_055214.1 Gene:TSPAN13 / 27075 HGNCID:21643 Length:204 Species:Homo sapiens


Alignment Length:199 Identity:43/199 - (21%)
Similarity:78/199 - (39%) Gaps:44/199 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLTGSANAVKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFLAGKFFSIPTFLIVIGSFIII 67
            ::.|.....|..|...||::.:..::||    |:.|...|:.|..:.:...:   :|.:|.|:.:
Human     1 MVCGGFACSKNCLCALNLLYTLVSLLLI----GIAAWGIGFGLISSLRVVGV---VIAVGIFLFL 58

  Fly    68 ISFFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNSINP 132
            |:..|..||:|.:..|:..:.::|.::||::.:...:...|..:..           .:...:..
Human    59 IALVGLIGAVKHHQVLLFFYMIILLLVFIVQFSVSCACLALNQEQQ-----------GQLLEVGW 112

  Fly   133 NATTKLWDDIQDEFECCGVTSYNDWITAFPNGDLPISC------CNV--------------HVGA 177
            |.|....:|||....|||..|.|      ||.....||      |:.              .||.
Human   113 NNTASARNDIQRNLNCCGFRSVN------PNDTCLASCVKSDHSCSPCAPIIGEYAGEVLRFVGG 171

  Fly   178 VGTF 181
            :|.|
Human   172 IGLF 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 42/191 (22%)
tetraspanin_LEL 126..201 CDD:351888 19/76 (25%)
TSPAN13NP_055214.1 Tetraspanin <55..190 CDD:459767 30/138 (22%)

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