DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and Tspan33

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_666285.1 Gene:Tspan33 / 232670 MGIID:1919012 Length:283 Species:Mus musculus


Alignment Length:256 Identity:77/256 - (30%)
Similarity:127/256 - (49%) Gaps:39/256 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VKYTLFGFNLIFLITGIILIAVGAGVGAVYTGY----KLFLAGKFFSIPTFLIVIGSFIIIISFF 71
            |||.||.||::|.:..::::|||     ||...    :..||.........|||:|..:.:::|.
Mouse    22 VKYLLFFFNMLFWVISMVMVAVG-----VYARLMKHAEAALACLAVDPAILLIVVGVLMFLLTFC 81

  Fly    72 GCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVL----RNDASDLIKTSLTYSLNEYNSINP 132
            ||.|:|:||.||:.:||:.|.|:|:|:|||||.|:|.    |...|::|..::.:..::.:..| 
Mouse    82 GCIGSLRENICLLQTFSLCLTIVFLLQLAAGILGFVFSDKARGKVSEIINNAIVHYRDDLDLQN- 145

  Fly   133 NATTKLWDDIQDEFECCGVTSYNDWITAF--------PNGD---LPISCC--NVHVGAVGTFTCN 184
                 |.|..|.:|.|||..||.||....        |:.:   :|.|||  ..:...:.|. |.
Mouse   146 -----LIDFGQKKFSCCGGISYRDWSQNMYFNCSEDNPSRERCSVPYSCCLPTPNQAVINTM-CG 204

  Fly   185 NAQSSV--ADRHKV----GCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREIK 239
            ....::  .:..||    ||:|....:|.::...||...:.:||.|..|::.:..:..:||
Mouse   205 QGMQALDYLEASKVIYTNGCIDKLVNWIHSNLFLLGGVALGLAIPQLVGILLSQVLVNQIK 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 75/251 (30%)
tetraspanin_LEL 126..201 CDD:351888 23/93 (25%)
Tspan33NP_666285.1 Tetraspanin 22..262 CDD:459767 75/251 (30%)
penumbra_like_LEL 116..236 CDD:239411 29/126 (23%)

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