DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and tsp-5

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_502621.3 Gene:tsp-5 / 192061 WormBaseID:WBGene00006631 Length:241 Species:Caenorhabditis elegans


Alignment Length:261 Identity:54/261 - (20%)
Similarity:95/261 - (36%) Gaps:80/261 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 NLIFLITGIILIAVGAGVGAVYTGYKLFLAGKFFSIP----------------------TFLIVI 61
            |.:|.|..:.||.    ||.:.|.|.:::....|.:.                      |..|:|
 Worm    11 NFLFFILNLGLIV----VGVIITWYSIWMVLHQFEVTVARTSLVNLLSVDNIECFYVYRTISIMI 71

  Fly    62 GSFIIIISFFGCWG-------ALKENYCLVLSFSVMLAIIFILELAAGISGYVLRND-------- 111
            |..::::.|.||:.       ||..:  |||.|     |:|::::.| |..::..||        
 Worm    72 GGCMVVLGFCGCFAVGFGSKTALSVH--LVLVF-----IVFVVKIVA-IVMFLANNDHLRREFVG 128

  Fly   112 --ASDLIKTSLTYSLNEYNSINPNATTKLWDDIQDEFECCGVTSYNDWITAFPNGDLPISC-CNV 173
              ..:|:.          |..|.:.|....|.:....:|||.....|::   |.|:.|.|| |..
 Worm   129 VYRDELVA----------NYHNNSRTKNTLDWVHTSLKCCGANGCEDFL---PAGNFPTSCECGT 180

  Fly   174 HVGAVGTFTCNNAQSSVADRHKVGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAREI 238
            ....|....|.....:|.:       ||        .:.:...|::..:::...:|||..:...|
 Worm   181 KNAVVRMEGCALITWAVFE-------DG--------TLQVAFLGLICMLIELGLMIFAAIVIDRI 230

  Fly   239 K 239
            :
 Worm   231 R 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 53/256 (21%)
tetraspanin_LEL 126..201 CDD:351888 17/75 (23%)
tsp-5NP_502621.3 Tetraspanin 11..167 CDD:459767 38/177 (21%)
tetraspanin_LEL 116..191 CDD:239401 18/87 (21%)

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