DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and tsp-9

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_508232.1 Gene:tsp-9 / 180472 WormBaseID:WBGene00006635 Length:233 Species:Caenorhabditis elegans


Alignment Length:186 Identity:45/186 - (24%)
Similarity:78/186 - (41%) Gaps:42/186 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LIVIGSFIIIISFFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLI-----K 117
            |:.:|:.:.::.||||.||..|:..|:..|..::.|:..:||.|.:.....|.:....|     |
 Worm    71 LVAVGALLFLVGFFGCCGAGCESPVLLGLFIFIIVILTAVELGATVFAMTNREEFVSSIQQVLKK 135

  Fly   118 TSLTYSLNEYNSINPNATTKLWDDIQDEFECCGVT--SYNDWITAFPNGDLPISCCNVHVGAVGT 180
            :|.||.|.:  :|.|         ||:.|:|||.|  :.|.:|.....|..|:|.          
 Worm   136 SSATYELRK--NIKP---------IQNVFQCCGATAQTQNRYIQDGLCGPEPLSA---------- 179

  Fly   181 FTCNNAQSSVADRHKVGCLDGFSGYISAHAVSLGAAGVVIAILQFFGVIFACYIAR 236
                          .|.|.|..|..:.:...|:.....::..::.|.::|:|.:.|
 Worm   180 --------------PVNCFDRISHMVQSWGESIVVVAFLLLAIELFAILFSCILCR 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 44/184 (24%)
tetraspanin_LEL 126..201 CDD:351888 16/76 (21%)
tsp-9NP_508232.1 Tetraspanin 8..221 CDD:459767 44/184 (24%)

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