DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and Cd9

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_031683.1 Gene:Cd9 / 12527 MGIID:88348 Length:226 Species:Mus musculus


Alignment Length:346 Identity:65/346 - (18%)
Similarity:111/346 - (32%) Gaps:126/346 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 KTAREEAAEKLTLTGDSSMEEVLKTIIQEKRIHTAAWIETDKGNGFHIMFSIESGPICDDVIYML 222
            |..|||::.::.::..|..|.::......:.:..|              |::.:..:.:|:..::
Mouse    50 KRIREESSARINISEGSCPERIITITGATECVFRA--------------FTMITIKLEEDLAALV 100

  Fly   223 SSWGVGQRFNSTISITSCTLYSQPP------------------------EVTEEPGEDGAKAGEM 263
            :        |.|::       |:||                        |:.|:.|.....||::
Mouse   101 A--------NGTVT-------SKPPVTLRLVIPASQCGSLIGKGGSKIKEIREKTGAQVQVAGDL 150

  Fly   264 NKNN-------DGSAWNTFLSTVRARLNVAQIVEEVKHDAQVSFDFVSMLAVASILAAFGLVEDS 321
            ..|:       .||. :..:..|:....|  |:|.....|.:.:.  ...|..::|.|...|.::
Mouse   151 LPNSTERGVTISGSQ-DAIIQCVKLICTV--ILESPPKGATIPYR--PSPAPGAVLLAGNQVFET 210

  Fly   322 SVFLIASMLISPLMGPIIAVIFGTVVKERTLQLIGLKNEIIGIMLTVTVGFIFGLIVCSIDDRYS 386
            |.|  ||       .|:.:|..|                              ||   .:...|:
Mouse   211 SEF--AS-------HPLFSVAQG------------------------------GL---DLQQAYT 233

  Fly   387 VGE--GITHEMLARCETHSLLVGIAIALPSGAAVAIAILGENIGSLVGVAISASLLPPAVNAGVL 449
            |..  ||.|..||:....|:..|:.   |...|.|..:|...|.|....|....|:|..      
Mouse   234 VQNQYGIPHSELAKLHQLSMQQGLG---PIAQATATQVLPAGIESSSQTASQELLIPND------ 289

  Fly   450 WALSCLYFLFGSEESRYGTLI 470
                    |.||...|.||.|
Mouse   290 --------LIGSIIGRQGTKI 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 11/77 (14%)
tetraspanin_LEL 126..201 CDD:351888 7/42 (17%)
Cd9NP_031683.1 Tetraspanin 10..217 CDD:459767 35/209 (17%)
CD9_LEL 109..191 CDD:239405 15/84 (18%)

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