DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and Cd53

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_031677.1 Gene:Cd53 / 12508 MGIID:88341 Length:219 Species:Mus musculus


Alignment Length:232 Identity:72/232 - (31%)
Similarity:114/232 - (49%) Gaps:30/232 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SANAVKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFLAGKFFSIPTFLIVIGSFIIIISFF 71
            |...:||.||.|||:|.:.|..::..|.......|...||....|.::...|:::||.|::::|.
Mouse     5 SLKLLKYVLFIFNLLFWVCGCCILGFGIYFLVQNTYGVLFRNLPFLTLGNILVIVGSIIMVVAFL 69

  Fly    72 GCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNSINPNATT 136
            ||.|::|||.||::||.|:|.||.:.|:...|..:|.....:.|:...|..|:..|:|  .|:|.
Mouse    70 GCMGSIKENKCLLMSFFVLLLIILLAEVTIAILLFVYEQKLNTLVAEGLNDSIQHYHS--DNSTM 132

  Fly   137 KLWDDIQDEFECCGVTSYNDWITAFPNGDLPISCCNVHVGAVGTFTCNNAQSSVADRHKVGCLDG 201
            |.||.||.:.:||||...:|| |:.|    |.||                 .|.||..  ||.:.
Mouse   133 KAWDFIQTQLQCCGVNGSSDW-TSGP----PSSC-----------------PSGADVQ--GCYNK 173

  Fly   202 FSGYISAHAVSLGAAGVVIAILQFFGVIFA----CYI 234
            ...:..::.:.:|...:.:.::|..|:.||    |.|
Mouse   174 AKSWFHSNFLYIGIITICVCVIQVLGMSFALTLNCQI 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 71/228 (31%)
tetraspanin_LEL 126..201 CDD:351888 25/74 (34%)
Cd53NP_031677.1 Tetraspanin 9..208 CDD:459767 69/224 (31%)
CD53_like_LEL 104..186 CDD:239417 29/107 (27%)

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