DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and Tsp68C

DIOPT Version :9

Sequence 1:NP_001162915.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_729926.1 Gene:Tsp68C / 117407 FlyBaseID:FBgn0043550 Length:362 Species:Drosophila melanogaster


Alignment Length:283 Identity:65/283 - (22%)
Similarity:106/283 - (37%) Gaps:86/283 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 KYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFLAGKFF--------SIP---TFLIVIGSFI 65
            |:.|...|.:|||.|::|:..|.   .:::..|..|..:..        |:|   .|.|.:|..|
  Fly     8 KFVLNLCNFLFLICGLLLVVSGL---YIFSDNKRILLSRLLAASSDRLSSLPQPLLFYIALGVAI 69

  Fly    66 -----IIISFFGCWGALKENYC-----------LVLSFSVMLAIIFILELAAGISGYVLRNDASD 114
                 .:.:..|.|.:....||           |:|:.||:...|.:.....|||          
  Fly    70 AGFVATLAAVVGFWASCLHTYCFLTIYFLSVVVLLLTESVLCLAITLWPHCLGIS---------- 124

  Fly   115 LIKTSLTYSL-NEYNSINPNATTKLWDDIQDEFECCGVTSYNDWITAF--------PNGDLPISC 170
            |.:|.:..|| :.|........|...|..|..|.|||:.|..|:.|:.        .|..:|:||
  Fly   125 LDETQMVRSLQSNYGVPGQEQFTNALDLAQVRFGCCGMRSSLDYDTSLWRLQGYGQRNWPVPLSC 189

  Fly   171 CNVHVGAVGTFTCNNAQSSVA----------------------DRHKVGCLDGFSG-YISAHAVS 212
            |.:          .||..|:|                      :||...||..... |...:::.
  Fly   190 CFL----------KNAGHSMAYLDPKPANESMCQSLERLSYERERHTESCLPHLDNWYREQYSIF 244

  Fly   213 LGAAGVVIAILQF---FGVIFAC 232
            |||: :::|:::|   ..:|.:|
  Fly   245 LGAS-LILAMIEFCVLLAIIMSC 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_001162915.1 Tetraspannin 11..238 CDD:278750 65/283 (23%)
tetraspanin_LEL 106..210 CDD:239401 29/135 (21%)
Tsp68CNP_729926.1 Tetraspannin 8..267 CDD:278750 65/283 (23%)
tetraspanin_LEL 117..241 CDD:239401 32/143 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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