DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and TSPAN1

DIOPT Version :10

Sequence 1:NP_523515.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_011538762.1 Gene:TSPAN1 / 10103 HGNCID:20657 Length:258 Species:Homo sapiens


Alignment Length:229 Identity:67/229 - (29%)
Similarity:109/229 - (47%) Gaps:20/229 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VKYTLFGFNLIFLITGIILIAVGAGV---GAVYTGYKLF-----LAGKFFSIPTFLIVIGSFIII 67
            :|..:..|||:..:.|..|:|||..|   ||.:  .|:|     .|.:|.::..|||..|..:..
Human     7 IKTMMILFNLLIFLCGAALLAVGIWVSIDGASF--LKIFGPLSSSAMQFVNVGYFLIAAGVVVFA 69

  Fly    68 ISFFGCWGALKENYCLVLSFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSL-NEYNSIN 131
            :.|.||:||..|:.|.:::|..:|.:|||.|:||.:...|....|...:...:..:: .:|.|  
Human    70 LGFLGCYGAKTESKCALVTFFFILLLIFIAEVAAAVVALVYTTMAEHFLTLLVVPAIKKDYGS-- 132

  Fly   132 PNATTKLWDDIQDEFECCGVTSYNDWITAFP----NGDLPISCCNVHVGAVGTFTCNNAQSSVAD 192
            ....|::|:......:|||.|:|.|:..: |    |...|..|||.:|......||...::.  |
Human   133 QEDFTQVWNTTMKGLKCCGFTNYTDFEDS-PYFKENSAFPPFCCNDNVTNTANETCTKQKAH--D 194

  Fly   193 RHKVGCLDGFSGYISAHAVSLGAAGVVIAILQFF 226
            :...||.:.....|..:||::|.....|..|:||
Human   195 QKVEGCFNQLLYDIRTNAVTVGGVAAGIGGLEFF 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_523515.1 Tetraspanin 11..236 CDD:459767 67/229 (29%)
tetraspanin_LEL 126..201 CDD:351888 22/78 (28%)
TSPAN1XP_011538762.1 Tetraspanin 7..>151 CDD:459767 42/147 (29%)
uroplakin_I_like_LEL 110..212 CDD:239409 24/106 (23%)

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