DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LManVI and Man2a1

DIOPT Version :9

Sequence 1:NP_609253.1 Gene:LManVI / 34206 FlyBaseID:FBgn0032069 Length:1007 Species:Drosophila melanogaster
Sequence 2:NP_032575.2 Gene:Man2a1 / 17158 MGIID:104669 Length:1150 Species:Mus musculus


Alignment Length:1091 Identity:272/1091 - (24%)
Similarity:458/1091 - (41%) Gaps:232/1091 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 INIHMVPHSHDDVGWLKTVDQYFYGHRSNIQHAGVQYIIDTVIAELIKDPARRFIQVETSFFAKW 102
            :.:.:|||||:|.|||||.:.||        ....|||.:.::.:|.:|.:|:|:..|.|:.|||
Mouse   165 LQVFVVPHSHNDPGWLKTFNDYF--------RDKTQYIFNNMVLKLKEDSSRKFMWSEISYLAKW 221

  Fly   103 WAEQSETAKQVVRKLVNEGRLEFTGGAWSMNDEAAVNYQSVIDQFTLGLKFLDDTFGSCARPRIG 167
            |.......|:.|:.|:..|:||...|.|.|.|||..:|.::|||...|.::|:...|  .:||.|
Mouse   222 WDIIDIPKKEAVKSLLQNGQLEIVTGGWVMPDEATPHYFALIDQLIEGHQWLEKNLG--VKPRSG 284

  Fly   168 WQIDPFGHSREQASIFAQMGYDGEFFARMDHRDKNDRIDNLGMEMIWDAS-DSLSNDEIFTGLLY 231
            |.|||||||...|.:..:.|:......|:.:..|.....:..:|..|..: |..|..:|...:: 
Mouse   285 WAIDPFGHSPTMAYLLKRAGFSHMLIQRVHYAIKKHFSLHKTLEFFWRQNWDLGSATDILCHMM- 348

  Fly   232 RHYSAPPGYCFDV-H-CGDDPII----DTKSY-----------------DNNVKSRVDDFLSYVT 273
                  |.|.:|: | ||.||.|    |.|..                 ..||:||....|....
Mouse   349 ------PFYSYDIPHTCGPDPKICCQFDFKRLPGGRYGCPWGVPPEAISPGNVQSRAQMLLDQYR 407

  Fly   274 SVAQHYRSNHIMIPMGDDF---QYEDAQVNFKNMDKLIKYVNERQAEGSTFNLFYSTPACYLNSL 335
            ..::.:|:..::.|:||||   :|.:..:..:|.::|..|:|.:  ......:.:.|.:.|.::|
Mouse   408 KKSKLFRTKVLLAPLGDDFRFSEYTEWDLQCRNYEQLFSYMNSQ--PHLKVKIQFGTLSDYFDAL 470

  Fly   336 HEGL--------QTWPNKTQDFFPYGSDDNSYWTGYFTSRPTQKRFERDGNHILQVAKQLSVFAE 392
            .:.:        ..:|..:.|||.|...|:.||:|||||||..||.:|.....::.|:   :..:
Mouse   471 EKAVAAEKKSSQSVFPALSGDFFTYADRDDHYWSGYFTSRPFYKRMDRIMESRIRAAE---ILYQ 532

  Fly   393 LNTKQQKE-------------DLEYLREIMGVMQHHDAITGTEKQHVSDDYDRILYDAILGGVNT 444
            |..||.::             .|...|..:|:.|||||||||.|..|..||...|:.::      
Mouse   533 LALKQAQKYKINKFLSSPHYTTLTEARRNLGLFQHHDAITGTAKDWVVVDYGTRLFQSL------ 591

  Fly   445 ARDGLRKLTNLPNGEFESCLQLNISE---------CAFTKDDA---------DNVVVTL------ 485
              :.|.|:..      :|...|.:.:         .||.:.|.         ..:::.|      
Mouse   592 --NSLEKIIG------DSAFLLILKDKKLYQSDPSKAFLEMDTKQSSQDSLPQKIIIQLSAQEPR 648

  Fly   486 ----YNPLAHTSTQYVRVPVKNENYEVTDEKGRVVASEVVPVAWQVLAL--EFRN-NDTQHELVF 543
                |||........|.:.|.:...:|..:.|:       ||..||.|:  :.|. :...:|:.|
Mouse   649 YLVVYNPFEQERHSVVSIRVNSATVKVLSDSGK-------PVEVQVSAVWNDMRTISQAAYEVSF 706

  Fly   544 KASVDKIANYYIKKVASQ-ETKNVAAHTKSKRSIKAEEANLEVPKRFKKVHSLKNATETFDDDEG 607
            .|.:..:.....|.:.|| .:.::|.:........||..          :..:||..     |.|
Mouse   707 LAHIPPLGLKVFKILESQSSSSHLADYVLYNNDGLAENG----------IFHVKNMV-----DAG 756

  Fly   608 ETVVQTSQVKLVIDNKTGLLKTVEMNGVSENIDQS-----YGVYRTYD-SGAYVFRQYHQADFIV 666
            :.:...:....:..:::||::.|.....|...:..     ||.....| ||||:|....|....|
Mouse   757 DAITIENPFLAIWFDRSGLMEKVRRKEDSRQHELKVQFLWYGTTNKRDKSGAYLFLPDGQGQPYV 821

  Fly   667 QYEGVEFTVYDGALVKEVHQQFSEYISQVIRIYEGKNLVEIEWQVGPIER----EEEFGREVVII 727
            ........|..|.:..:| ..|.|:::..:|:|   |:..||.|...:..    .....||:|:.
Mouse   822 SLRPPFVRVTRGRIYSDV-TCFLEHVTHKVRLY---NIQGIEGQSMEVSNIVNIRNVHNREIVMR 882

  Fly   728 FNSTIASDGVSYTDSNGREMIKRVKDQRETFTPGLDRQPTAANYYPVTSRIALQDSKKRIAVLND 792
            .:|.|.:....|||.||.::     ..|.|    :.:.|..||.||:.:...:||::.|:.:|:.
Mouse   883 ISSKINNQNRYYTDLNGYQI-----QPRRT----MSKLPLQANVYPMCTMAYIQDAEHRLTLLSA 938

  Fly   793 RAQGGASMLNGQLELMLHRRLVRDDGYGVGEALNEEKYGQPMIARGKVYLILSPSDESTAAEREA 857
            ::.|.:||.:||:|:.:.|||::||..|:|:.:::.|      ....::.||  .::.:|...|.
Mouse   939 QSLGASSMASGQIEVFMDRRLMQDDNRGLGQGVHDNK------ITANLFRIL--LEKRSAVNMEE 995

  Fly   858 EKEIHLPFWKFFSKNTGS---------TTAAAKSVPSF----------NDFPKSVHLLTL----- 898
            ||:..:.:....|..|.|         ..:.....|:|          :..|..:||:.|     
Mouse   996 EKKSPVSYPSLLSHMTSSFLNHPFLPMVLSGQLPSPAFELLSEFPLLQSSLPCDIHLVNLRTIQS 1060

  Fly   899 ---EPFNDDEVLLRVENFLDHTEGQVVSFNIRPIFDYLNGVEIRETTLDGNLPLSDMKRF-KFHH 959
               :.::|:..|:.      |.:|....|:.|       |:.:..:|..|.  :|.:|.| ||  
Mouse  1061 KMGKGYSDEAALIL------HRKGFDCQFSSR-------GIGLPCSTTQGK--MSVLKLFNKF-- 1108

  Fly   960 DSSGQKPDAVEYFTSA-----HKPLAAEQSQEASEFSVTLHPMQIRTFIIK 1005
                    |||....:     |.|..|:...|     |:|.||:|.||.|:
Mouse  1109 --------AVESLVPSSLSLMHSPPDAQNMSE-----VSLSPMEISTFRIR 1146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManVINP_609253.1 GH38N_AMII_LAM_like 38..312 CDD:212121 91/300 (30%)
Alpha-mann_mid 359..434 CDD:286360 32/87 (37%)
Glyco_hydro_38C 482..1002 CDD:285047 128/576 (22%)
Man2a1NP_032575.2 PLN02701 127..1148 CDD:178304 272/1091 (25%)
GH38N_Man2A1 164..507 CDD:212131 104/360 (29%)
Alpha-mann_mid 502..587 CDD:214875 32/87 (37%)
Glyco_hydro_38C 757..1143 CDD:285047 101/436 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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