DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LManV and man2b1

DIOPT Version :9

Sequence 1:NP_001285763.1 Gene:LManV / 34205 FlyBaseID:FBgn0032068 Length:982 Species:Drosophila melanogaster
Sequence 2:XP_005169420.1 Gene:man2b1 / 541519 ZFINID:ZDB-GENE-050327-52 Length:984 Species:Danio rerio


Alignment Length:1031 Identity:420/1031 - (40%)
Similarity:595/1031 - (57%) Gaps:119/1031 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IVLCVAFLALQAKSAQAVCGYESCHETKSNMINIHLVPHSHDDVGWLKTVDQYYYGHRNNIQHAG 70
            ::.|.:.:........::|||:||..||.:|:|:|||||:|||||||||||||:||.||||||||
Zfish    13 LLFCFSLVFSLPTGRNSICGYKSCPATKPSMLNVHLVPHTHDDVGWLKTVDQYFYGDRNNIQHAG 77

  Fly    71 VQYIIDTVISELIKNPDRRFIQVETSFFSKWWNEQSETMRAVVKMLVNEGRLQFINGAWSMNDEA 135
            ||||:|:||.:|.|:|.||||.|||:||.:||.:|::..|.:|..|||||||:||||.|.|:|||
Zfish    78 VQYILDSVIDQLQKDPARRFIYVETAFFYRWWRQQNQNTRRIVTQLVNEGRLEFINGGWCMSDEA 142

  Fly   136 AVNYQSVIDQFTVGLKFLDDTFGVCGRPRVGWQIDPFGHSREQASIYAQMGFDGEFFSRMDHNDK 200
            ..:|.:||||.|:||:||:||||.||||||.|.||||||:||.|||:||||:||.||.|:|:.||
Zfish   143 TTHYSAVIDQMTLGLRFLNDTFGECGRPRVAWHIDPFGHAREHASIFAQMGYDGFFFGRLDYQDK 207

  Fly   201 GRRMNDLALEMIWDASESLSQ--VKLFTGLLYTFYWDTPGFCFDVHCSDDPIIDS-DSYDNNVKS 262
            .|||....:||:|.|||||:.  ..||||:|...|....|||:|..|.|.||.|. |..|.||..
Zfish   208 DRRMKTKEMEMLWRASESLTPPIADLFTGVLPNGYNPPEGFCWDQSCDDAPIRDDPDLEDYNVDE 272

  Fly   263 RVDDFIAYAAQVAEKFRTNHIMIPMGGDFQYEDAEVNYKNMDKLIKYVNERQSSGSKYNIIYSTP 327
            .|..|:..:.:.|:.::||||::.||.|||||:|.:.||||||||||||..|:.|||.|::||||
Zfish   273 IVQKFLNASHKQADYYKTNHIIMTMGSDFQYENANLWYKNMDKLIKYVNALQAKGSKLNVLYSTP 337

  Fly   328 TCYLNSVHKSVQSYPNKTLDFFPYGSDTNSFWTGYYTSRPTQKRFERDGNHILQVAKQLSAFAEL 392
            :|||..::.:..::|.||.|||||..|.:.|||||:||||..|.:||..|..||...||......
Zfish   338 SCYLQELNLANFTWPMKTDDFFPYADDAHDFWTGYFTSRPALKLYERLSNSRLQTCNQLEVLGGP 402

  Fly   393 SSTQ---QKEDLEYLREIMGVMQHHDAITGTEKQHVSDDYDRIL------YDAIVG---GVKTAG 445
            :||.   .:.|.:.:|..|||.|||||::|||||||::||.|.|      .:.:|.   .|.:..
Zfish   403 TSTSGPFGEGDSDTMRRAMGVAQHHDAVSGTEKQHVANDYARRLATGWAHCEVLVSNSLAVLSGS 467

  Fly   446 DALRKLTNLPNGEFESCLQLNISECAFTKDGADNVVVTLYNALAHTTKQYVRVPVKNENYQVTDE 510
            :|.|..          |..||||.|..| :.:....:.:||.|..|.:..||:||....|.|||.
Zfish   468 EAPRVF----------CENLNISVCPLT-ESSHKFSMNVYNPLGRTVRWPVRLPVNGSVYNVTDA 521

  Fly   511 KGRVVASEIVPVPAEVLALEFRDSDTQHELVFKASVDKI--ANYYIKKVDSK----ESSNGVRVI 569
            .|:.|.||::|:......:.......:.||||:.....:  :.|.|..|..:    .|.|.|   
Zfish   522 NGKAVDSEVIPLSKSRKEVRQNRGFAKSELVFQVEAPPLGYSTYIISMVQDQPPVSRSKNAV--- 583

  Fly   570 SQPKANAETYDDEETIVQTSLIKLVLDNKTGLLKRVEMNGVSENIE--QSYGLYRT--------- 623
              |.:           :|...:|:..|:.||||..:......:.|.  |::..|..         
Zfish   584 --PSS-----------IQNKFLKVTFDSTTGLLSSLTNLETQQTIRLTQNFFWYNASAGNNKESH 635

  Fly   624 YDSGAYVFRQYNQGDFVIQEDG--VEFTVYDGALVKEVHQRFSEYISQVIRISEDKPYVEFEWLV 686
            ..||||:||..:...|:|.:..  ...::|:.  |:||.||||.::|||:|:.||:..:|.||.|
Zfish   636 QPSGAYIFRPNSSDPFIISKTAEIQAVSLYNS--VQEVTQRFSPWVSQVVRLYEDRRELELEWTV 698

  Fly   687 GPIPVEEEFGTEVVTIFSSEIASNGVFYTDSNGRELIRREKDKREDFTPELAVQPTSGNYYPITS 751
            ||:|||:..|.||:|...::|.|:|.|||||||||::.|.||.|..:..: ..:|.:||||||.|
Zfish   699 GPVPVEDGLGKEVITRLDTDIQSSGYFYTDSNGREVLERRKDYRPTWDLK-QTEPIAGNYYPINS 762

  Fly   752 RIALQDSNKRLAILNDRAQGGTSMKDGQIELMLHRRLVRDDGYGVGEALNEE-KYGQPLIARGKV 815
            |..::|..::|.::.||:||.:|:.:|.:|:||||||:.||..||||.|:|. ::...|:|||::
Zfish   763 RAYIKDDKRQLTVVTDRSQGASSIYNGSLEIMLHRRLLYDDFRGVGEPLSEPGEFAHGLVARGRL 827

  Fly   816 FLILNAADESTSAEREAEKEFHLPLWKFFSKNTGSTTAAAKSVPSFDD----------------- 863
            .|.|:..        ||..:.|.||         :.:...:.:.||.|                 
Zfish   828 LLTLSPP--------EAAADLHRPL---------AQSMVLQPLLSFQDGAPSPGTKLEFSGLQAA 875

  Fly   864 FPKSVHLLTLEPFNDDEILLRVENFKDHIEGKV----VSFNIRPIFDYLNGVEIRETTLDGNLPL 924
            .|.:|||||:..::.|.:|:|:|:.....|.|.    |:.|::.:|..|..:...|.:|..|...
Zfish   876 LPPAVHLLTVSQWDQDSVLVRLEHQYQAKESKTHSQPVTVNLQKLFSTLQVLGASEMSLGANQWK 940

  Fly   925 SDMKQFKFHAEGSGIRGSEPEYYTSSHKPLSANQTQDAAEFAVTLYPMQIRTFIIK 980
            .||.:..::.|...:             |.:|   :|.:.:.|||.||:||||:::
Zfish   941 EDMIRLHWNTEKDAL-------------PPTA---RDPSSWEVTLKPMEIRTFLLR 980

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManVNP_001285763.1 GH38N_AMII_LAM_like 37..311 CDD:212121 168/276 (61%)
Alpha-mann_mid 358..433 CDD:286360 39/77 (51%)
Glyco_hydro_38C 481..977 CDD:285047 167/536 (31%)
man2b1XP_005169420.1 PLN02701 44..982 CDD:178304 411/1000 (41%)
GH38N_AMII_LAM_like 44..322 CDD:212121 169/277 (61%)
Alpha-mann_mid 368..446 CDD:214875 39/77 (51%)
Glyco_hydro_38C 558..977 CDD:285047 146/470 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581807
Domainoid 1 1.000 82 1.000 Domainoid score I8330
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55625
OrthoDB 1 1.010 - - D201312at2759
OrthoFinder 1 1.000 - - FOG0001724
OrthoInspector 1 1.000 - - otm24899
orthoMCL 1 0.900 - - OOG6_101099
Panther 1 1.100 - - O PTHR11607
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1279
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.720

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