DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LManV and man2a2

DIOPT Version :10

Sequence 1:NP_609252.1 Gene:LManV / 34205 FlyBaseID:FBgn0032068 Length:982 Species:Drosophila melanogaster
Sequence 2:NP_001006777.1 Gene:man2a2 / 448465 XenbaseID:XB-GENE-981388 Length:909 Species:Xenopus tropicalis


Alignment Length:789 Identity:208/789 - (26%)
Similarity:352/789 - (44%) Gaps:129/789 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GYESCHETK---SNMINIHLVPHSHDDVGWLKTVDQYYYGHRNNIQHAGVQYIIDTVISELIKNP 86
            |::..::.|   :..:.:.:|||||:|.||:||.|:|||..        .|:|::.::.:|.::|
 Frog   151 GFDITYDPKEWDNEPLQVFVVPHSHNDPGWIKTFDKYYYDQ--------TQHILNNMVVKLHEDP 207

  Fly    87 DRRFIQVETSFFSKWWNEQSETMRAVVKMLVNEGRLQFINGAWSMNDEAAVNYQSVIDQFTVG-- 149
            .|:||..|.|||||||:..:...||.|:.||..|:|:...|.|.|.|||..:|.::|||...|  
 Frog   208 RRKFIWSEISFFSKWWDNINSQKRAAVRRLVASGQLEMTTGGWVMPDEANTHYFAMIDQMIEGHQ 272

  Fly   150 --LKFLDDTFGVCGRPRVGWQIDPFGHSREQASIYAQMGFDGEFFSRMDHNDKGRRMNDLALEMI 212
              .|.||.|      ||.||.:||||||.....|..:.........|:.::.|.......:||.:
 Frog   273 WLKKNLDAT------PRSGWAVDPFGHSSTMPYILRRSNLTSMLIQRVHYSIKKHFAATQSLEFM 331

  Fly   213 WDAS-ESLSQVKLFTGLLYTFYWDTPGFC---------FD--------VHC--SDDPIIDSDSYD 257
            |..: :..|...:|..::..:.:|.|..|         ||        ::|  ...|...:||  
 Frog   332 WRQTWDPDSSTDIFCHMMPFYSYDVPHTCGPDPKICCQFDFRRLPGGRINCPWKVPPRAITDS-- 394

  Fly   258 NNVKSRVDDFIAYAAQVAEKFRTNHIMIPMGGDFQY---EDAEVNYKNMDKLIKYVNERQSSGSK 319
             ||..|.:..:....:.::.:|:..:::|:|.||:|   ::.:..:.|..||..|:|.......:
 Frog   395 -NVAERANILLDQYKKKSKLYRSKVVLVPLGDDFRYDKIQEWDAQFLNYQKLFDYMNSHPELHVQ 458

  Fly   320 YNIIYSTPTCYLNSVHKSV--------QSYPNKTLDFFPYGSDTNSFWTGYYTSRPTQKRFERDG 376
            ..  :.|.:.|.::::|.:        ..:|..:.|||.|....:.:|||||||||..|..:|..
 Frog   459 AQ--FGTLSDYFDALYKRMGVVPGIKPPDFPVVSGDFFSYADREDHYWTGYYTSRPFYKSMDRVL 521

  Fly   377 NHILQVAKQLSAF----AELSSTQQKEDL-EY-----LREIMGVMQHHDAITGTEKQHVSDDYDR 431
            ...|:.|:.|.:.    |..:.|:.|..| :|     .|..:|:.|||||||||.|:.|..||..
 Frog   522 ESHLRGAEILYSLAINHARKAGTESKYPLSDYALLTDARRNLGLFQHHDAITGTAKEAVVIDYGV 586

  Fly   432 ILYDAIVGGVKTAGDALRKLTNLPNGEF------------ESCL-QLNISECAFTKDGADNVVVT 483
            .|..:::...:...:|...|......::            ||.| |.::.|....|..|....|.
 Frog   587 RLLHSLMNLKRIIINAAHYLVVADKEKYHYDHSVPFFSTDESRLTQESLPEKTVIKLTASPRYVV 651

  Fly   484 LYNALAHTTKQYVRVPVKNENYQVTDEKGRVVASEIVPVPAEVLALEFRDSDTQHELVFKASVDK 548
            ::|.:.......|.:.|...|.:|..|.|:.||:::.||...|..:    :...:::.|.|.:..
 Frog   652 VFNPVEQNRLCVVSLLVNTYNVRVLTEDGQPVAAQLSPVWQSVTDM----NPDVYQVSFTARLPS 712

  Fly   549 IANYYIK---KVDSKES-SNGVRV------ISQPKAN------AETYDDEETIVQTSLIKLVLDN 597
            :.....:   .:|:..: .:.|||      :|..|.:      ||:..|:..| :...:::....
 Frog   713 LGLSIFQLHASIDTHTTLKSNVRVHLHGRELSIKKQDVFPVKVAESSTDDFHI-ENQYMQVWFSG 776

  Fly   598 KTGLLKRVEMNGVSENIEQS-------YGLYRTYD-SGAYVFRQYNQGDFVIQEDGVEFTVYDGA 654
            .|||||.::..|  |..||.       ||...:.| ||||:|....:......:|.....|.:|.
 Frog   777 TTGLLKSIKRAG--EEQEQKINMQFLIYGTRTSKDKSGAYLFLPDGEAKPYTPKDPPVVKVTEGP 839

  Fly   655 LVKEVHQRFSEYISQVIR---------ISEDKPYVEFEWLVGPIPVEEEFGTEVVTIFSSEIASN 710
            ...||..:: :::.||:|         :|.|        :...|.:.:....|:....|::|.|.
 Frog   840 FYSEVTCQY-QHVQQVMRLYNLPGTEGLSLD--------ISSLIDIRDHVNKEIAMRLSTDIQSE 895

  Fly   711 GVFYTDSNG 719
            .:|:||.||
 Frog   896 DIFFTDLNG 904

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManVNP_609252.1 GH38N_AMII_LAM_like 37..311 CDD:212121 91/300 (30%)
PLN02701 39..873 CDD:178304 206/772 (27%)
man2a2NP_001006777.1 PLN02701 128..>906 CDD:178304 208/789 (26%)

Return to query results.
Submit another query.