DRSC/TRiP Functional Genomics Resources

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Protein Alignment LManV and alpha-Man-IIb

DIOPT Version :9

Sequence 1:NP_001285763.1 Gene:LManV / 34205 FlyBaseID:FBgn0032068 Length:982 Species:Drosophila melanogaster
Sequence 2:NP_001262614.1 Gene:alpha-Man-IIb / 41913 FlyBaseID:FBgn0026616 Length:1249 Species:Drosophila melanogaster


Alignment Length:1162 Identity:280/1162 - (24%)
Similarity:461/1162 - (39%) Gaps:309/1162 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 INIHLVPHSHDDVGWLKTVDQYYYGHRNNIQHAGVQYIIDTVISELIKNPDRRFIQVETSFFSKW 101
            :.|.:|||||:|.|||||...|:        .:..:.|::.:::::.:..|..||..|.||...|
  Fly   168 LKIIVVPHSHNDPGWLKTFTNYF--------QSDSRQILNLLVTKMQEYTDMTFIWSEISFLQLW 224

  Fly   102 WNEQSETMRAVVKMLVNEGRLQFINGAWSMNDEAAVNYQSVIDQFTVGLKFLDDTFGVCGRPRVG 166
            |::...|.:..:|.|::.||::...|.|.|.|||.|:...::||...|.::|.:...|  .|:||
  Fly   225 WDQAHPTKQRALKRLIDAGRIEITTGGWVMTDEANVHIYPMLDQLIEGHQWLKNNLNV--TPKVG 287

  Fly   167 WQIDPFGHSREQASIYAQMGFDGEFFSRMDHNDKGRRMNDLALEMIWDASESLSQVKLFTGLLYT 231
            |.||||||......:.:...|:|....|:.:..|.......:.:.||..                
  Fly   288 WSIDPFGHGSTVPYLLSGANFEGTIIQRIHYAWKQWFARQQSGDFIWKP---------------- 336

  Fly   232 FYWD-------------TPGFCFDVH-----CSDDPII-----------DSDSY--------DNN 259
             ||.             |....||::     |...|.|           :...|        |:|
  Fly   337 -YWRSRKDKDSEAGSLLTHNMPFDIYSIKGSCGPHPFICLNFDFRKIPGEYTEYSVKAQFITDDN 400

  Fly   260 VKSRVDDFIAYAAQVAEKFRTNHIMIPMGGDFQY-EDAEVN--YKNMDKLIKYV--NERQSSGSK 319
            ::|:....:...|:.|..|..|..:||:|.||:| :|.||:  |:|..|||.::  |.|     .
  Fly   401 LESKAQLLLEQYARTASLFPHNVALIPVGDDFRYNKDREVDQQYQNYKKLIDHIMANRR-----L 460

  Fly   320 YN--IIYSTPTCYLNSVHKSVQ----SYPNKTLDFFPYGSDTNS-----FWTGYYTSRPTQKRFE 373
            ||  |.:.||:.|..::.:.::    .:|....|||.| ||..|     :|:||:|:||..|...
  Fly   461 YNADIRFGTPSDYFEAIKERMKDHTPGFPTFKGDFFVY-SDIFSEGRPAYWSGYFTTRPFYKLLS 524

  Fly   374 RDGNHILQVAKQLSAFAELSSTQQKED------------LEYLREIMGVMQHHDAITGTEKQHVS 426
            .:..|.|:.|:.:...|..::.|.|.:            :...|..:|:.|||||||||.|..|.
  Fly   525 SELEHQLRSAEIVFTLAYNTARQAKRENAIKIYEKNYELIINARRNLGLFQHHDAITGTSKAAVM 589

  Fly   427 DDYDRILYDAIVGGVKTAGDALRKLTNLPNGEFESCLQLNISE----------CAFTKD------ 475
            .||...|:::....||..               ||||:|.:.:          ..|.:|      
  Fly   590 RDYAMRLFESTQNMVKMQ---------------ESCLELLLQKGQPRHHGFLLSEFERDNFNKLP 639

  Fly   476 --------GADNVVVT---------------------LYNALAHTTKQYVRVPVKNENYQVTDEK 511
                    ..|....|                     |||:||....:.|.:.|::.|.::.::|
  Fly   640 RKMPIQMANGDESTPTVPAGEGGAGGSSSSGSVGSFVLYNSLAQKRLEVVTLRVQHPNVKIVNDK 704

  Fly   512 G-RVVASEIVPV-------------PAEVLALEFRDSDTQHELVFKASVDKIA-NYYIKKVDSKE 561
            | .:...:|.||             .........|.|..|.|::|.|.::.:: :.|..:||...
  Fly   705 GVELNHIQINPVWNITDTYEQGLGTSVSGTVGRIRTSTRQFEVMFVAELEPLSLSTYRVQVDEVN 769

  Fly   562 SSNGVRVI-------SQPKANA--ETYDDEETIV-------------QTSLIKLVLDNKTGLLKR 604
            ....:..|       |||.:.:  |..:...|.|             :...::|:.|.|:|.||.
  Fly   770 FKRNIATIYCDDCTESQPASVSPPEEIESSPTSVFEARGKPAGDIQLENPHMRLLFDEKSGFLKT 834

  Fly   605 VEMNGVSENIEQ------SYGLYRT--YDSGAYVFR---QYNQGDFVIQE--DGVEFTVYDGALV 656
            :......:.:.:      .:..||:  :.||||:|:   :.::.:..:.|  ..:...:..|.:.
  Fly   835 ITRKNQKKELLKPLQCNIKFAAYRSAQFHSGAYLFKTDPEQSEAEKEVLEGYTDMRIIITSGPIA 899

  Fly   657 KEVHQRFSEYISQVIRISEDKP------YVEFEWLVGPIPVEEEFGTEVVTIFSSEIASNG---- 711
            .:|...:..:::..:||...:.      |||.:....|.|...|  ||:...|.:.|.:..    
  Fly   900 SDVTVIYGPFLAHTVRIFNTRTHLDAAIYVENDIDFEPPPKNRE--TELFMRFVTNIDNIAQAPM 962

  Fly   712 ------------------VFYTDSNGRELIRREKDKREDFTPELAVQPTSGNYYPITSRIALQDS 758
                              |||:|.||.:...|.|      .|.:.::   |||:||||...:|||
  Fly   963 QRDPLKEPVDAATMPELPVFYSDQNGFQYHERIK------VPAIGIE---GNYFPITSGAFIQDS 1018

  Fly   759 NKRLAILNDRAQGGTSMKDGQIELMLHRRLVRDDGYGVGEALNEEKYGQPLIARGKVFLILNAAD 823
            ..||.:|...|||..|.:.||:|:||.||.:.||..|:||.:.:.:     :.|.|.:|::....
  Fly  1019 RLRLTLLTTHAQGAASYEPGQLEVMLDRRTLYDDYRGMGEGVVDSR-----LTRHKFWLLVEDLP 1078

  Fly   824 E-------------STSAEREAEKEFHLPLWKFFSKNTGSTTAAAKSVPSFDDFPK-----SVHL 870
            .             |..|::.| .....|...:|..|......||..:|.....||     .|||
  Fly  1079 GGQHVTQPPSYKVLSQQAQQLA-NALRYPPNLYFVSNLEQPELAAALLPLVRLLPKGPLPCDVHL 1142

  Fly   871 LTLEPFNDDEILLRVENFKD-------HIEGKVVSFNIRPIFDYLNGVEIRETTLDGNLPLS--- 925
            .||...:|.|:.|    |..       |.:|...|.:..           ||.:::...|||   
  Fly  1143 TTLRTLSDPELQL----FPSASALLVLHRQGFDCSVSAG-----------RELSMEAICPLSSKG 1192

  Fly   926 ----DMKQFKFHA-EGSGIRGSEPEYYTSSHKPLSANQTQDAAEFAVTLYPMQIRTF 977
                .:.:...|. |.:.:.|:|.:....|:      ..:..||  ::|.||::|||
  Fly  1193 LGNVQLGRLSLHTIEATSLTGTEQKSSRESY------HIRSLAE--ISLEPMELRTF 1241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManVNP_001285763.1 GH38N_AMII_LAM_like 37..311 CDD:212121 85/315 (27%)
Alpha-mann_mid 358..433 CDD:286360 28/86 (33%)
Glyco_hydro_38C 481..977 CDD:285047 138/627 (22%)
alpha-Man-IIbNP_001262614.1 PLN02701 148..1246 CDD:178304 280/1162 (24%)
GH38N_AMII_GMII_SfManIII_like 167..514 CDD:212120 103/378 (27%)
Alpha-mann_mid 508..596 CDD:286360 28/87 (32%)
Glyco_hydro_38C 813..1241 CDD:285047 108/467 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450135
Domainoid 1 1.000 50 1.000 Domainoid score I680
eggNOG 1 0.900 - - E1_KOG1959
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 49 1.000 Inparanoid score I462
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.790

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