DRSC/TRiP Functional Genomics Resources

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Protein Alignment LManV and alpha-Man-IIb

DIOPT Version :10

Sequence 1:NP_609252.1 Gene:LManV / 34205 FlyBaseID:FBgn0032068 Length:982 Species:Drosophila melanogaster
Sequence 2:NP_650494.2 Gene:alpha-Man-IIb / 41913 FlyBaseID:FBgn0026616 Length:1249 Species:Drosophila melanogaster


Alignment Length:1162 Identity:280/1162 - (24%)
Similarity:461/1162 - (39%) Gaps:309/1162 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 INIHLVPHSHDDVGWLKTVDQYYYGHRNNIQHAGVQYIIDTVISELIKNPDRRFIQVETSFFSKW 101
            :.|.:|||||:|.|||||...|:        .:..:.|::.:::::.:..|..||..|.||...|
  Fly   168 LKIIVVPHSHNDPGWLKTFTNYF--------QSDSRQILNLLVTKMQEYTDMTFIWSEISFLQLW 224

  Fly   102 WNEQSETMRAVVKMLVNEGRLQFINGAWSMNDEAAVNYQSVIDQFTVGLKFLDDTFGVCGRPRVG 166
            |::...|.:..:|.|::.||::...|.|.|.|||.|:...::||...|.::|.:...|  .|:||
  Fly   225 WDQAHPTKQRALKRLIDAGRIEITTGGWVMTDEANVHIYPMLDQLIEGHQWLKNNLNV--TPKVG 287

  Fly   167 WQIDPFGHSREQASIYAQMGFDGEFFSRMDHNDKGRRMNDLALEMIWDASESLSQVKLFTGLLYT 231
            |.||||||......:.:...|:|....|:.:..|.......:.:.||..                
  Fly   288 WSIDPFGHGSTVPYLLSGANFEGTIIQRIHYAWKQWFARQQSGDFIWKP---------------- 336

  Fly   232 FYWD-------------TPGFCFDVH-----CSDDPII-----------DSDSY--------DNN 259
             ||.             |....||::     |...|.|           :...|        |:|
  Fly   337 -YWRSRKDKDSEAGSLLTHNMPFDIYSIKGSCGPHPFICLNFDFRKIPGEYTEYSVKAQFITDDN 400

  Fly   260 VKSRVDDFIAYAAQVAEKFRTNHIMIPMGGDFQY-EDAEVN--YKNMDKLIKYV--NERQSSGSK 319
            ::|:....:...|:.|..|..|..:||:|.||:| :|.||:  |:|..|||.::  |.|     .
  Fly   401 LESKAQLLLEQYARTASLFPHNVALIPVGDDFRYNKDREVDQQYQNYKKLIDHIMANRR-----L 460

  Fly   320 YN--IIYSTPTCYLNSVHKSVQ----SYPNKTLDFFPYGSDTNS-----FWTGYYTSRPTQKRFE 373
            ||  |.:.||:.|..::.:.::    .:|....|||.| ||..|     :|:||:|:||..|...
  Fly   461 YNADIRFGTPSDYFEAIKERMKDHTPGFPTFKGDFFVY-SDIFSEGRPAYWSGYFTTRPFYKLLS 524

  Fly   374 RDGNHILQVAKQLSAFAELSSTQQKED------------LEYLREIMGVMQHHDAITGTEKQHVS 426
            .:..|.|:.|:.:...|..::.|.|.:            :...|..:|:.|||||||||.|..|.
  Fly   525 SELEHQLRSAEIVFTLAYNTARQAKRENAIKIYEKNYELIINARRNLGLFQHHDAITGTSKAAVM 589

  Fly   427 DDYDRILYDAIVGGVKTAGDALRKLTNLPNGEFESCLQLNISE----------CAFTKD------ 475
            .||...|:::....||..               ||||:|.:.:          ..|.:|      
  Fly   590 RDYAMRLFESTQNMVKMQ---------------ESCLELLLQKGQPRHHGFLLSEFERDNFNKLP 639

  Fly   476 --------GADNVVVT---------------------LYNALAHTTKQYVRVPVKNENYQVTDEK 511
                    ..|....|                     |||:||....:.|.:.|::.|.::.::|
  Fly   640 RKMPIQMANGDESTPTVPAGEGGAGGSSSSGSVGSFVLYNSLAQKRLEVVTLRVQHPNVKIVNDK 704

  Fly   512 G-RVVASEIVPV-------------PAEVLALEFRDSDTQHELVFKASVDKIA-NYYIKKVDSKE 561
            | .:...:|.||             .........|.|..|.|::|.|.::.:: :.|..:||...
  Fly   705 GVELNHIQINPVWNITDTYEQGLGTSVSGTVGRIRTSTRQFEVMFVAELEPLSLSTYRVQVDEVN 769

  Fly   562 SSNGVRVI-------SQPKANA--ETYDDEETIV-------------QTSLIKLVLDNKTGLLKR 604
            ....:..|       |||.:.:  |..:...|.|             :...::|:.|.|:|.||.
  Fly   770 FKRNIATIYCDDCTESQPASVSPPEEIESSPTSVFEARGKPAGDIQLENPHMRLLFDEKSGFLKT 834

  Fly   605 VEMNGVSENIEQ------SYGLYRT--YDSGAYVFR---QYNQGDFVIQE--DGVEFTVYDGALV 656
            :......:.:.:      .:..||:  :.||||:|:   :.::.:..:.|  ..:...:..|.:.
  Fly   835 ITRKNQKKELLKPLQCNIKFAAYRSAQFHSGAYLFKTDPEQSEAEKEVLEGYTDMRIIITSGPIA 899

  Fly   657 KEVHQRFSEYISQVIRISEDKP------YVEFEWLVGPIPVEEEFGTEVVTIFSSEIASNG---- 711
            .:|...:..:::..:||...:.      |||.:....|.|...|  ||:...|.:.|.:..    
  Fly   900 SDVTVIYGPFLAHTVRIFNTRTHLDAAIYVENDIDFEPPPKNRE--TELFMRFVTNIDNIAQAPM 962

  Fly   712 ------------------VFYTDSNGRELIRREKDKREDFTPELAVQPTSGNYYPITSRIALQDS 758
                              |||:|.||.:...|.|      .|.:.::   |||:||||...:|||
  Fly   963 QRDPLKEPVDAATMPELPVFYSDQNGFQYHERIK------VPAIGIE---GNYFPITSGAFIQDS 1018

  Fly   759 NKRLAILNDRAQGGTSMKDGQIELMLHRRLVRDDGYGVGEALNEEKYGQPLIARGKVFLILNAAD 823
            ..||.:|...|||..|.:.||:|:||.||.:.||..|:||.:.:.:     :.|.|.:|::....
  Fly  1019 RLRLTLLTTHAQGAASYEPGQLEVMLDRRTLYDDYRGMGEGVVDSR-----LTRHKFWLLVEDLP 1078

  Fly   824 E-------------STSAEREAEKEFHLPLWKFFSKNTGSTTAAAKSVPSFDDFPK-----SVHL 870
            .             |..|::.| .....|...:|..|......||..:|.....||     .|||
  Fly  1079 GGQHVTQPPSYKVLSQQAQQLA-NALRYPPNLYFVSNLEQPELAAALLPLVRLLPKGPLPCDVHL 1142

  Fly   871 LTLEPFNDDEILLRVENFKD-------HIEGKVVSFNIRPIFDYLNGVEIRETTLDGNLPLS--- 925
            .||...:|.|:.|    |..       |.:|...|.:..           ||.:::...|||   
  Fly  1143 TTLRTLSDPELQL----FPSASALLVLHRQGFDCSVSAG-----------RELSMEAICPLSSKG 1192

  Fly   926 ----DMKQFKFHA-EGSGIRGSEPEYYTSSHKPLSANQTQDAAEFAVTLYPMQIRTF 977
                .:.:...|. |.:.:.|:|.:....|:      ..:..||  ::|.||::|||
  Fly  1193 LGNVQLGRLSLHTIEATSLTGTEQKSSRESY------HIRSLAE--ISLEPMELRTF 1241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManVNP_609252.1 GH38N_AMII_LAM_like 37..311 CDD:212121 85/315 (27%)
PLN02701 39..873 CDD:178304 253/1039 (24%)
alpha-Man-IIbNP_650494.2 PLN02701 148..1246 CDD:178304 280/1162 (24%)

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