DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LManV and Man2a1

DIOPT Version :9

Sequence 1:NP_001285763.1 Gene:LManV / 34205 FlyBaseID:FBgn0032068 Length:982 Species:Drosophila melanogaster
Sequence 2:NP_032575.2 Gene:Man2a1 / 17158 MGIID:104669 Length:1150 Species:Mus musculus


Alignment Length:1087 Identity:270/1087 - (24%)
Similarity:459/1087 - (42%) Gaps:227/1087 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YESCHETKSNMINIHLVPHSHDDVGWLKTVDQYYYGHRNNIQHAGVQYIIDTVISELIKNPDRRF 90
            ||: .|.....:.:.:|||||:|.|||||.:.|:   |:.     .|||.:.::.:|.::..|:|
Mouse   155 YEA-DEWDHEPLQVFVVPHSHNDPGWLKTFNDYF---RDK-----TQYIFNNMVLKLKEDSSRKF 210

  Fly    91 IQVETSFFSKWWNEQSETMRAVVKMLVNEGRLQFINGAWSMNDEAAVNYQSVIDQFTVGLKFLDD 155
            :..|.|:.:|||:......:..||.|:..|:|:.:.|.|.|.|||..:|.::|||...|.::|:.
Mouse   211 MWSEISYLAKWWDIIDIPKKEAVKSLLQNGQLEIVTGGWVMPDEATPHYFALIDQLIEGHQWLEK 275

  Fly   156 TFGVCGRPRVGWQIDPFGHSREQASIYAQMGFDGEFFSRMDHNDKGRRMNDLALEMIWDASESL- 219
            ..||  :||.||.|||||||...|.:..:.||......|:.:..|........||..|..:..| 
Mouse   276 NLGV--KPRSGWAIDPFGHSPTMAYLLKRAGFSHMLIQRVHYAIKKHFSLHKTLEFFWRQNWDLG 338

  Fly   220 SQVKLFTGLLYTFYWDTPGFCFDVH-CSDDPIIDSDSYD----------------------NNVK 261
            |...:...::..:.:|.|      | |..||.| ...:|                      .||:
Mouse   339 SATDILCHMMPFYSYDIP------HTCGPDPKI-CCQFDFKRLPGGRYGCPWGVPPEAISPGNVQ 396

  Fly   262 SRVDDFIAYAAQVAEKFRTNHIMIPMGGDF---QYEDAEVNYKNMDKLIKYVNERQSSGSKYNII 323
            ||....:....:.::.|||..::.|:|.||   :|.:.::..:|.::|..|:|.:..  .|..|.
Mouse   397 SRAQMLLDQYRKKSKLFRTKVLLAPLGDDFRFSEYTEWDLQCRNYEQLFSYMNSQPH--LKVKIQ 459

  Fly   324 YSTPTCYLNSVHKSVQS--------YPNKTLDFFPYGSDTNSFWTGYYTSRPTQKRFERDGNHIL 380
            :.|.:.|.:::.|:|.:        :|..:.|||.|....:.:|:||:||||..||.:|.....:
Mouse   460 FGTLSDYFDALEKAVAAEKKSSQSVFPALSGDFFTYADRDDHYWSGYFTSRPFYKRMDRIMESRI 524

  Fly   381 QVAKQLSAFAELSSTQQKEDLEYL-----------REIMGVMQHHDAITGTEKQHVSDDYDRILY 434
            :.|:.|...| |...|:.:..::|           |..:|:.|||||||||.|..|..||...|:
Mouse   525 RAAEILYQLA-LKQAQKYKINKFLSSPHYTTLTEARRNLGLFQHHDAITGTAKDWVVVDYGTRLF 588

  Fly   435 DAIVGGVKTAGDAL-------RKL-------------------TNLPNGEFESCLQLNISECAFT 473
            .::....|..||:.       :||                   .:||.   :..:||:..|..: 
Mouse   589 QSLNSLEKIIGDSAFLLILKDKKLYQSDPSKAFLEMDTKQSSQDSLPQ---KIIIQLSAQEPRY- 649

  Fly   474 KDGADNVVVTLYNALAHTTKQYVRVPVKNENYQVTDEKGRVVASEIVPVPAEVLAL--EFRD-SD 535
                    :.:||.........|.:.|.:...:|..:.|:       ||..:|.|:  :.|. |.
Mouse   650 --------LVVYNPFEQERHSVVSIRVNSATVKVLSDSGK-------PVEVQVSAVWNDMRTISQ 699

  Fly   536 TQHELVFKASVDKIANYYIKKVDSKESS----------------NGVRVISQPKANAETYDDEET 584
            ..:|:.|.|.:..:.....|.::|:.||                ||:..:.    |.....|..|
Mouse   700 AAYEVSFLAHIPPLGLKVFKILESQSSSSHLADYVLYNNDGLAENGIFHVK----NMVDAGDAIT 760

  Fly   585 IVQTSLIKLVLDNKTGLLKRVEMNGVSENIEQS-----YGLYRTYD-SGAYVFRQYNQGDFVIQE 643
            | :...:.:..| ::||:::|.....|...|..     ||.....| ||||:|....||...:..
Mouse   761 I-ENPFLAIWFD-RSGLMEKVRRKEDSRQHELKVQFLWYGTTNKRDKSGAYLFLPDGQGQPYVSL 823

  Fly   644 DGVEFTVYDGALVKEVHQRFSEYISQVIRISEDKPYVEFEWLVGP-------IPVEEEFGTEVVT 701
            ......|..|.:..:| ..|.|:::..:|:      ...:.:.|.       :.:......|:|.
Mouse   824 RPPFVRVTRGRIYSDV-TCFLEHVTHKVRL------YNIQGIEGQSMEVSNIVNIRNVHNREIVM 881

  Fly   702 IFSSEIASNGVFYTDSNGRELIRREKDKREDFTPELAVQPTSGNYYPITSRIALQDSNKRLAILN 766
            ..||:|.:...:|||.||.::..|.         .::..|...|.||:.:...:||:..||.:|:
Mouse   882 RISSKINNQNRYYTDLNGYQIQPRR---------TMSKLPLQANVYPMCTMAYIQDAEHRLTLLS 937

  Fly   767 DRAQGGTSMKDGQIELMLHRRLVRDDGYGVGEALNEEKYGQPLIARGKVFLILNAADESTSAERE 831
            .::.|.:||..||||:.:.|||::||..|:|:.:::.|      ....:|.||  .::.::...|
Mouse   938 AQSLGASSMASGQIEVFMDRRLMQDDNRGLGQGVHDNK------ITANLFRIL--LEKRSAVNME 994

  Fly   832 AEKEFHLPLWKFFSKNTGS---------TTAAAKSVPSFD----------DFPKSVHLLTL---- 873
            .||:..:......|..|.|         ..:.....|:|:          ..|..:||:.|    
Mouse   995 EEKKSPVSYPSLLSHMTSSFLNHPFLPMVLSGQLPSPAFELLSEFPLLQSSLPCDIHLVNLRTIQ 1059

  Fly   874 ----EPFNDDEILLRVENFKDHIEGKVVSFNIRPIFDYLNGVEIRETTLDGNLPLSDMKQF-KFH 933
                :.::|:..|:.      |.:|....|:.|       |:.:..:|..|.  :|.:|.| || 
Mouse  1060 SKMGKGYSDEAALIL------HRKGFDCQFSSR-------GIGLPCSTTQGK--MSVLKLFNKF- 1108

  Fly   934 AEGSGIRGSEPEYYTSSHKPLSANQTQDAAEFAVTLYPMQIRTFIIK 980
                .:....|...:..|.|..|   |:.:|  |:|.||:|.||.|:
Mouse  1109 ----AVESLVPSSLSLMHSPPDA---QNMSE--VSLSPMEISTFRIR 1146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManVNP_001285763.1 GH38N_AMII_LAM_like 37..311 CDD:212121 87/300 (29%)
Alpha-mann_mid 358..433 CDD:286360 31/85 (36%)
Glyco_hydro_38C 481..977 CDD:285047 123/555 (22%)
Man2a1NP_032575.2 PLN02701 127..1148 CDD:178304 270/1087 (25%)
GH38N_Man2A1 164..507 CDD:212131 101/361 (28%)
Alpha-mann_mid 502..587 CDD:214875 31/85 (36%)
Glyco_hydro_38C 757..1143 CDD:285047 101/436 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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