DRSC/TRiP Functional Genomics Resources

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Protein Alignment LManIV and GMII

DIOPT Version :10

Sequence 1:NP_609251.2 Gene:LManIV / 34204 FlyBaseID:FBgn0032067 Length:978 Species:Drosophila melanogaster
Sequence 2:NP_196999.1 Gene:GMII / 831347 AraportID:AT5G14950 Length:1173 Species:Arabidopsis thaliana


Alignment Length:1094 Identity:277/1094 - (25%)
Similarity:482/1094 - (44%) Gaps:227/1094 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ETKANMVNIHLVPHSHNDVGWLKTVDQSYYGYKNKIHHAGVQYILDSVVSQLLQDPKRRFIQVET 96
            |.:...:.|.:|||||||.||..||:: ||..:::       :|||::|..|.:|.:|:||..|.
plant   147 EWEKEKLKIFVVPHSHNDPGWKLTVEE-YYQRQSR-------HILDTIVETLSKDSRRKFIWEEM 203

  Fly    97 AFFAKWWNVQSESMKKVVTKLVNEGRFEFTGGAWSMNDEANVNYQGVIDQFTVGLKFLNETFGSC 161
            ::..:||...|.:.::.:||||.:|:.|..||.|.||||||.:|..:|:|...|..:||:|.|..
plant   204 SYLERWWRDASPNKQEALTKLVKDGQLEIVGGGWVMNDEANSHYFAIIEQIAEGNMWLNDTIGVI 268

  Fly   162 GRPRVGWQIDTFGHSREQAAIFAHMGYDGQFFSRMDHNDKDTRMNDLTMEMIWDAS-ESMSGVSL 225
              |:..|.||.||:|...|.:...||::.....|..:..|........:|.||..| ::|....:
plant   269 --PKNSWAIDPFGYSSTMAYLLRRMGFENMLIQRTHYELKKDLAQHKNLEYIWRQSWDAMETTDI 331

  Fly   226 FSGMLYNFYS-DTPGFC---------FDI---------LCT--DQPIIDGDSEENNVKQRVDDFI 269
            |..|: .||| |.|..|         ||.         ||.  ..|:   ::...||::|....:
plant   332 FVHMM-PFYSYDIPHTCGPEPAICCQFDFARMRGFKYELCPWGKHPV---ETTLENVQERALKLL 392

  Fly   270 SYAKNVSEVYITNHIMVPMGGDFQY---EDAKVNYKNMDKLIKYINERQASGSKYNIFYSTPSCY 331
            ...:..|.:|.||.:::|:|.||:|   ::|:..::|...|..:||...:..::..  :.|...|
plant   393 DQYRKKSTLYRTNTLLIPLGDDFRYISIDEAEAQFRNYQMLFDHINSNPSLNAEAK--FGTLEDY 455

  Fly   332 LNSLHQSLE----------------SWPNKTQDFFPYAHEKNSFWTGFFTSRPTQKRFERDGNHM 380
            ..::.:..:                .:|:.:.|||.||..:..:|:|::.|||..|..:|...|.
plant   456 FRTVREEADRVNYSRPGEVGSGQVVGFPSLSGDFFTYADRQQDYWSGYYVSRPFFKAVDRVLEHT 520

  Fly   381 LQVAKQLSVLANLTSEEHKID-----------LDYLRQVMGVMQHHDAITGTEKQAVSDDYDRMM 434
            |:.|:  .:::.|....|:|.           |...|:.:.:.||||.:|||.|..|..||...|
plant   521 LRGAE--IMMSFLLGYCHRIQCEKFPTSFTYKLTAARRNLALFQHHDGVTGTAKDYVVQDYGTRM 583

  Fly   435 YEAIVGASNNARDALRLLTNMPYGEFESCLRLNISEC---------------AFTKDGADNVLVT 484
            :.::.........|:.:|..:.:.:.:|....:..|.               ...::|..:.:: 
plant   584 HTSLQDLQIFMSKAIEVLLGIRHEKEKSDQSPSFFEAEQMRSKYDARPVHKPIAAREGNSHTVI- 647

  Fly   485 LYNPLAHSSTQYVRIPVKEENYQVTDEKGRTVPSEVVPVPWQVLALEYRSNDT-----QHELVFK 544
            |:||...:..:.|.:.|......|.|.....|||::.|        |.:.:||     :|.|.:|
plant   648 LFNPSEQTREEVVTVVVNRAEISVLDSNWTCVPSQISP--------EVQHDDTKLFTGRHRLYWK 704

  Fly   545 ATVNKVS--SYSI-------KKVESSEVKHSSIKKINP---------REDNNSETVVENSVVKLV 591
            |::..:.  :|.|       :|...|::|::|  :.:|         .:.:|..|.:.|....||
plant   705 ASIPALGLRTYFIANGNVECEKATPSKLKYAS--EFDPFPCPPPYSCSKLDNDVTEIRNEHQTLV 767

  Fly   592 MDNHTGRL-KSVEMNGVSEKIVQNFGVYKSHTSCAYTFRQDGDIE-LFENDFEFTVYEGSLVKEV 654
            .|...|.| |.|..||....:.:..|:|.|..|.||.|:.||:.: :.:.|......||.||:||
plant   768 FDVKNGSLRKIVHRNGSETVVGEEIGMYSSPESGAYLFKPDGEAQPIVQPDGHVVTSEGLLVQEV 832

  Fly   655 HQH-VNDW----ISQVIRIYEGVSR-----VELEWMVGPIPIDDKLGSEF-----VTNFKSEISS 704
            ..: ...|    :||..|:|.|.:.     ||:|:.|      :.||::|     :..:|:::.:
plant   833 FSYPKTKWEKSPLSQKTRLYTGGNTLQDQVVEIEYHV------ELLGNDFDDRELIVRYKTDVDN 891

  Fly   705 NGVFYTDSNGRELMKRVKDKREDFVSDLSRQPVSGNFYPVTSRIALQ-DDTKRLVLLNDRSQGGA 768
            ..|||:|.||.::     .:||.:    .:.|:.||:||:.|...:| .:.:|..:.:.:|.|.|
plant   892 KKVFYSDLNGFQM-----SRRETY----DKIPLQGNYYPMPSLAFIQGSNGQRFSVHSRQSLGVA 947

  Fly   769 SLEDGALEMLIHRRHLFNDGGGVGEALNETQYGK---GLIARGKLYLILDSATDGDTVTERKTEK 830
            ||::|.||:::.||.:.:||.|:|:.:.:.:...   .|:|...:     |..|..:.|..:...
plant   948 SLKEGWLEIMLDRRLVRDDGRGLGQGVMDNRAMTVVFHLLAESNI-----SQADPASNTNPRNPS 1007

  Fly   831 --------ELFLPFWKFFSKTGGVEITP---SKSLPDFND-------LPQSVHLLTLEF-----F 872
                    .|..|...|.:|      .|   |..:|.:..       ||..:|::..:.     :
plant  1008 LLSHLIGAHLNYPINTFIAK------KPQDISVRVPQYGSFAPLAKPLPCDLHIVNFKVPRPSKY 1066

  Fly   873 SEQ--EILIRFEHFLDK--------SEGRVIS--------FNIRDIFDSLGGLAIRETTLDGNMP 919
            |:|  |...||...|::        .:||.::        .|..|:|..|....::.|:|  |:.
plant  1067 SQQLEEDKPRFALILNRRAWDSAYCHKGRQVNCTSMANEPVNFSDMFKDLAASKVKPTSL--NLL 1129

  Fly   920 LSDMKRFKFHAQESGTKPSSVEYSTAQHKPLEAVKSDEASLFAVTLYPMQIRTF 973
            ..||:...:..||.....|         :|.|.         .|::.||:||.:
plant  1130 QEDMEILGYDDQELPRDSS---------QPREG---------RVSISPMEIRAY 1165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManIVNP_609251.2 PLN02701 31..793 CDD:178304 234/868 (27%)
GH38N_AMII_LAM_like 39..312 CDD:212121 95/297 (32%)
GMIINP_196999.1 PLN02701 114..1170 CDD:178304 277/1094 (25%)

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