DRSC/TRiP Functional Genomics Resources

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Protein Alignment LManIV and aman-3

DIOPT Version :9

Sequence 1:NP_609251.2 Gene:LManIV / 34204 FlyBaseID:FBgn0032067 Length:978 Species:Drosophila melanogaster
Sequence 2:NP_001361919.1 Gene:aman-3 / 172178 WormBaseID:WBGene00018594 Length:1046 Species:Caenorhabditis elegans


Alignment Length:1000 Identity:246/1000 - (24%)
Similarity:428/1000 - (42%) Gaps:176/1000 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ETKANMVNIHLVPHSHNDVGWLKTVDQSYYGYKNKIHHAGVQYILDSVVSQLLQDPKRRFIQVET 96
            :::...:.::::|.:|.|.|||:|.::         :......|||::...::::.|.||:..|.
 Worm   113 KSRTEKLKVYVLPFTHVDPGWLETFER---------YTKSTNQILDNMHQFMMKNEKMRFMWAEF 168

  Fly    97 AFFAKWWNVQSESMKKVVTKLVNEGRFEFTGGAWSMNDEANVNYQGVIDQFTVGLKFLNETFGSC 161
            .||.:||::|:|.:|:.|.|||.|||.|...|:|.|.||||..:...:|....|.:|:::.||. 
 Worm   169 VFFERWWSLQNEQVKEDVKKLVTEGRLELATGSWVMTDEANPYFPVSVDNIVEGFQFIHKNFGI- 232

  Fly   162 GRPRVGWQIDTFGHSREQAAIFAHMGYDGQFFSRMDHNDKDTRMNDLTMEMIWDASESMSGVS-- 224
             :|:..|..|.||:|.....:|...|......:|:.|..|.|..:...:...|......:|..  
 Worm   233 -KPQTMWSNDPFGYSNSVPYLFKKSGVHRTVINRIHHKLKQTLQSQKAIPFKWRQYFDATGEDDV 296

  Fly   225 LFSGMLYNFY-------SDTPGFC-FDILCTDQPIIDGDSEEN----NVKQRVDDFISYAKNVSE 277
            |...:.|..|       ||....| ||..........|...|.    ||..:.:..::..:.:||
 Worm   297 LTQILPYTHYDILNSCGSDASVCCEFDFKRMTHWSCPGPKPEKITNANVAAKAEKLVNQLEKMSE 361

  Fly   278 VYITNHIMVPMGGDFQY---EDAKVNYKNMDKLIKYINERQASGSKYNIFYSTPSCYLNSLHQSL 339
            :|....|::..|.||::   |:....:.|...:...||:    ||:..|.:.|.:.|.|    .|
 Worm   362 MYKAPVILMMHGDDFRFDMIEEWNQQHDNFIPVFDEINK----GSRVEIRFGTFTDYFN----DL 418

  Fly   340 ESW---------PNKTQDFFPYAHEKNSFWTGFFTSRPTQKR-------FERDGNHMLQVAKQLS 388
            |.|         |..:.|||||......:|||::|:||..||       ..|:|:.||.:.:   
 Worm   419 EKWYSNNKDSEPPTVSGDFFPYMCALGDYWTGYYTTRPFFKRQGRLLHSLIRNGDIMLSMLR--- 480

  Fly   389 VLANLTSEEHKID-----LDYLRQVMGVMQHHDAITGTEKQAVSDDYDRMMYEAIVGAS----NN 444
              .||  ::.||.     |:..|:.:.:.|||||||||.|.:|.|:|..:::.:||..:    |.
 Worm   481 --VNL--KQRKIGENVKRLEAARRNLALFQHHDAITGTSKVSVMDNYSELLHASIVSTNIVLENL 541

  Fly   445 ARDALRLLTNMPYG-EFESCLRLNISECAFTKDGADNVLVTLYNPLAHSSTQYVRIPVKEENYQV 508
            .:..:.|...:..| |.::.:.|..||    |:      :.::|......|...:|.|||....|
 Worm   542 TKSDIDLYPRIHDGIELQTIVDLESSE----KE------IRIFNSHLFEITDVFKIRVKEREVIV 596

  Fly   509 TDEKGRTVPSEVVPVPWQVLALEYRSNDTQHE---LVFKATVNKVSSYSIKKVESSEVKHSSIKK 570
            :.: |:.:.:::.|.        ::.:..:.:   |:|:|||..:|...:|.........:.:.|
 Worm   597 SID-GKIIEAQLEPF--------FQKSKVEKDSFLLLFQATVLPLSMMKVKVQRGDSGGLTKMAK 652

  Fly   571 INPREDN-----NSETV--------VENSVVKLVMDNHTGRLKSVEMNGVSEKI--VQNFGVYKS 620
            |..::.|     :|.|:        :|....|:..|..||.::||.....:.|.  .|:|..||.
 Worm   653 IEAKDTNAWDLGSSWTIASSTSAPNLETPYFKVSNDPITGAIQSVNKLSDNSKFHCQQSFYNYKE 717

  Fly   621 HTSCAYTFRQDGDIELFENDFEFTVYE-----GSLVKEVHQHVNDWISQV-IRIYEGVSRVELEW 679
            ....||..|      |..|..|...|:     |.|.:.::|...:.:.:: |...||.|..|::.
 Worm   718 AGGGAYLMR------LHTNPKEIIEYQWLKVSGPLRQSIYQKSTNVLQRLSIHNVEGPSGEEVDI 776

  Fly   680 MVGPIPIDDKLGSEFVTNFKSEISSNGVFYTDSNGRELMKRVKDKREDFVSDLSRQPVSGNFYPV 744
            .:. |.|..:..:|.:|.|.:: ....:.||||.|.:|::|          |..:.||..|:||:
 Worm   777 SMS-IDITKERNTELMTRFSTK-WDKPLTYTDSVGMQLLRR----------DFYKLPVQSNYYPM 829

  Fly   745 TSRIALQDDTKRLVLLNDRSQGGASLEDGALEMLIHRRHLFNDGGGVGEALNETQYGKGLIARGK 809
            .:...||...:||.::::...|...||.|.:|:.|.|....:||.|:|...:........:.. |
 Worm   830 PTAAVLQSGKQRLSIVSNVEHGARFLESGTVEINIDRILNQDDGKGLGTGPDAIPIDMKPVDM-K 893

  Fly   810 LYLILDSATDGDTVTER----------KTEKELFLPFWKFFSKTGGVEITPSKSLPDFNDL---- 860
            ..||.||.....|...|          ..:..::.|.  .|::       |.|...|..::    
 Worm   894 FKLIFDSLESDPTENSRYSTHSFRAQQAVQTIIYPPM--MFNR-------PPKKEEDIEEIEEIS 949

  Fly   861 ----PQSVHLLTLEFFSE-QEILIRFEHFLDKSEGRV------ISFNIRDIFDSLGGLAIRETTL 914
                |..:.|||:....: :::||.:.|....|..:|      :..::.|:...||...:::|.|
 Worm   950 NLKFPCDIQLLTVRPLEDNKQLLILYRHATVCSSQKVGNCGGELKSSLMDLLIKLGAKQVQKTDL 1014

  Fly   915 DG-----------NMPLSDMKRFKF 928
            .|           .:|..::|.|.|
 Worm  1015 SGVTRVGGIIKVEYLPDYELKTFDF 1039

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManIVNP_609251.2 GH38N_AMII_LAM_like 39..312 CDD:212121 76/289 (26%)
Alpha-mann_mid 359..434 CDD:214875 31/86 (36%)
Glyco_hydro_38C 483..973 CDD:285047 111/505 (22%)
aman-3NP_001361919.1 PLN02701 117..978 CDD:178304 233/933 (25%)
GH38N_AMII_GMII_SfManIII_like 118..452 CDD:212120 96/352 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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