DRSC/TRiP Functional Genomics Resources

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Protein Alignment LManIII and GMII

DIOPT Version :10

Sequence 1:NP_609250.2 Gene:LManIII / 34203 FlyBaseID:FBgn0032066 Length:1003 Species:Drosophila melanogaster
Sequence 2:NP_196999.1 Gene:GMII / 831347 AraportID:AT5G14950 Length:1173 Species:Arabidopsis thaliana


Alignment Length:1126 Identity:286/1126 - (25%)
Similarity:466/1126 - (41%) Gaps:244/1126 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QSEAVCYESCPETKSNMINIHLVPHSHDDLGWLKTVDQYYYGNKHNIQHAGVQYIFDTVVAELSK 84
            |...|.|:. .|.:...:.|.:|||||:|.||..||::||....        ::|.||:|..|||
plant   137 QGWRVTYKD-DEWEKEKLKIFVVPHSHNDPGWKLTVEEYYQRQS--------RHILDTIVETLSK 192

  Fly    85 DSRRRFIQVETGFFAKWWEDQSETKKKLVKTLVNEGRLEFTGGAWSMNDEAAVNYQSVIDQFAVG 149
            ||||:||..|..:..:||.|.|..|::.:..||.:|:||..||.|.|||||..:|.::|:|.|.|
plant   193 DSRRKFIWEEMSYLERWWRDASPNKQEALTKLVKDGQLEIVGGGWVMNDEANSHYFAIIEQIAEG 257

  Fly   150 LKFLNDNFGVCGRPRVGWQIDAFGHSREQASMFAQMAFDGQFFARMDQNDKNKRVDNLGLEMVWD 214
            ..:|||..||.  |:..|.||.||:|...|.:..:|.|:.....|.....|.....:..||.:|.
plant   258 NMWLNDTIGVI--PKNSWAIDPFGYSSTMAYLLRRMGFENMLIQRTHYELKKDLAQHKNLEYIWR 320

  Fly   215 AS-ETLEEMDFFTGML-YNHYSAP------PGFCFDSLCQ-DDPIIDGKSYD------------- 257
            .| :.:|..|.|..|: :..|..|      |..|    || |...:.|..|:             
plant   321 QSWDAMETTDIFVHMMPFYSYDIPHTCGPEPAIC----CQFDFARMRGFKYELCPWGKHPVETTL 381

  Fly   258 NNVKSRVDDFLNYASNLAGYYRSNHIMVPMGDDFQY---ENAYMNYKNMDKLIKYVNERQASGSK 319
            .||:.|....|:.....:..||:|.:::|:||||:|   :.|...::|...|..::|...:..::
plant   382 ENVQERALKLLDQYRKKSTLYRTNTLLIPLGDDFRYISIDEAEAQFRNYQMLFDHINSNPSLNAE 446

  Fly   320 YNIFYSTAGCYLNSLHK----------------SLQSFPNKTQDFLPHSHEAKSFWTGFFTSRPT 368
            ..  :.|...|..::.:                .:..||:.:.||..::...:.:|:|::.|||.
plant   447 AK--FGTLEDYFRTVREEADRVNYSRPGEVGSGQVVGFPSLSGDFFTYADRQQDYWSGYYVSRPF 509

  Fly   369 QKRFERDGNHILQVAK-QLSVLADLSGEEQHK--------DLDYLRQIMAVMQHHDAITGTEKQE 424
            .|..:|...|.|:.|: .:|.|.......|.:        .|...|:.:|:.||||.:|||.|..
plant   510 FKAVDRVLEHTLRGAEIMMSFLLGYCHRIQCEKFPTSFTYKLTAARRNLALFQHHDGVTGTAKDY 574

  Fly   425 VSNDYDRLLYDAILGGANTARDALRVLTNQPNGEFQSCLKLNISECAFTKENAD----------- 478
            |..||...::.::.........|:.||....:.:.:|....:..|....:...|           
plant   575 VVQDYGTRMHTSLQDLQIFMSKAIEVLLGIRHEKEKSDQSPSFFEAEQMRSKYDARPVHKPIAAR 639

  Fly   479 ---DFMVTLYNPLAHTSTQYVRVPVKEDSYQVTDEKGGLVASELVPVPWEVLSLEFRNNDT---- 536
               ...|.|:||...|..:.|.|.|......|.|.....|.|::.|        |.:::||    
plant   640 EGNSHTVILFNPSEQTREEVVTVVVNRAEISVLDSNWTCVPSQISP--------EVQHDDTKLFT 696

  Fly   537 -QHELVFKASVNKIA--TYFIKKIDKTTEVDITVNTQTEQSVNEEESNVKVPKRFKKVHSLKT-- 596
             :|.|.:|||:..:.  ||||          ...|.:.|::         .|.:.|.......  
plant   697 GRHRLYWKASIPALGLRTYFI----------ANGNVECEKA---------TPSKLKYASEFDPFP 742

  Fly   597 -----DLETLDDQETIVQNSLIKLVIDNNTGRL-KTVEMNGVSEDIDQTFGMYKTARSCHYIFRQ 655
                 ....||:..|.::|....||.|...|.| |.|..||....:.:..|||.:..|..|:|:.
plant   743 CPPPYSCSKLDNDVTEIRNEHQTLVFDVKNGSLRKIVHRNGSETVVGEEIGMYSSPESGAYLFKP 807

  Fly   656 DADLE-LVEDAFDFTVYDGESVKEVHQH-VNEW----ISQVIRIYEGVNR-----VEFEW---LV 706
            |.:.: :|:........:|..|:||..: ..:|    :||..|:|.|.|.     ||.|:   |:
plant   808 DGEAQPIVQPDGHVVTSEGLLVQEVFSYPKTKWEKSPLSQKTRLYTGGNTLQDQVVEIEYHVELL 872

  Fly   707 GPVPIDDELGKEIVTIFKSGISSGGVFYTDSNGREMMRREK-DKREDFSPDLSEQPVSGNYYPVT 770
            |. ..||   :|::..:|:.:.:..|||:|.||.:|.|||. ||          .|:.|||||:.
plant   873 GN-DFDD---RELIVRYKTDVDNKKVFYSDLNGFQMSRRETYDK----------IPLQGNYYPMP 923

  Fly   771 SRMALQDSS-KRMVLLNDRSQGGASLEDGRLEMMLHRRHIFADGSGAAEAINEQQFGKGLIARGK 834
            |...:|.|: :|..:.:.:|.|.|||::|.||:||.||.:..||.|         .|:|::....
plant   924 SLAFIQGSNGQRFSVHSRQSLGVASLKEGWLEIMLDRRLVRDDGRG---------LGQGVMDNRA 979

  Fly   835 LFLYLNAIEDGATASERVAEK---------------EIHLPFWKFFSKSNNIQSDVTKTLSDFND 884
            :.:..:.:.:...:....|..               .::.|...|.:|.   ..|::..:..:..
plant   980 MTVVFHLLAESNISQADPASNTNPRNPSLLSHLIGAHLNYPINTFIAKK---PQDISVRVPQYGS 1041

  Fly   885 -------LPQSVHLLTLEPYSKDEILLRLENFLDQTEGNVVSFSI---------------RQI-- 925
                   ||..:|::..:       :.|...:..|.|.:...|::               ||:  
plant  1042 FAPLAKPLPCDLHIVNFK-------VPRPSKYSQQLEEDKPRFALILNRRAWDSAYCHKGRQVNC 1099

  Fly   926 -------------FDDLGGLEIRETTLDGNLPLSDMKRLKFHHDGSGPSHSVPEYFTSLHKPLAA 977
                         |.||...:::.|:|  ||...||:.|.:.                 .:.|..
plant  1100 TSMANEPVNFSDMFKDLAASKVKPTSL--NLLQEDMEILGYD-----------------DQELPR 1145

  Fly   978 DKTQDASEFSVTLKPMQIRTF 998
            |.:| ..|..|::.||:||.:
plant  1146 DSSQ-PREGRVSISPMEIRAY 1165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManIIINP_609250.2 PLN02701 20..820 CDD:178304 251/894 (28%)
GH38N_AMII_LAM_like 37..311 CDD:212121 100/298 (34%)
GMIINP_196999.1 PLN02701 114..1170 CDD:178304 286/1126 (25%)

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