DRSC/TRiP Functional Genomics Resources

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Protein Alignment LManIII and AT3G26720

DIOPT Version :9

Sequence 1:NP_001285762.1 Gene:LManIII / 34203 FlyBaseID:FBgn0032066 Length:1003 Species:Drosophila melanogaster
Sequence 2:NP_189306.1 Gene:AT3G26720 / 822284 AraportID:AT3G26720 Length:1019 Species:Arabidopsis thaliana


Alignment Length:1054 Identity:380/1054 - (36%)
Similarity:562/1054 - (53%) Gaps:108/1054 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SVKNLAILLALFASYI--VQSEAVCYESCPETKSNMINIHLVPHSHDDLGWLKTVDQYYYGNKHN 65
            :||..::.|.|.|..|  |.||.:.|.:.|......||:|||||||||:||||||||||.|:.::
plant     2 AVKCFSLYLILAAIVIGGVTSEYIEYNTKPRIVPEKINVHLVPHSHDDVGWLKTVDQYYVGSNNS 66

  Fly    66 IQHAGVQYIFDTVVAELSKDSRRRFIQVETGFFAKWWEDQSETKKKLVKTLVNEGRLEFTGGAWS 130
            |:.|.||.:.|:|:|.|..|..|:||.||..||.:||..||..||..||.||:.|:|||..|...
plant    67 IRGACVQNVLDSVIASLLDDENRKFIYVEMAFFQRWWRQQSNAKKVKVKKLVDSGQLEFINGGMC 131

  Fly   131 MNDEAAVNYQSVIDQFAVGLKFLNDNFGVCGRPRVGWQIDAFGHSREQASMF-AQMAFDGQFFAR 194
            |:|||..:|..:|||..:|.:|:...||..  ||||||||.||||..||.:. |:..||..||||
plant   132 MHDEATPHYIDMIDQTTLGHQFIKTEFGQV--PRVGWQIDPFGHSAVQAYLLGAEFGFDSLFFAR 194

  Fly   195 MDQNDKNKRVDNLGLEMVWDASETL-EEMDFFTGMLYNHYSAPPGFCFD-----SLCQDDPIIDG 253
            :|..|:.||:....||::|..|::| .....|||:...||..|.||.|:     :..||||::  
plant   195 IDYQDRAKRLREKTLEVIWQGSKSLGSSSQIFTGVFPRHYDPPEGFTFEINDVSAPIQDDPLL-- 257

  Fly   254 KSYDNNVKSRVDDFLNYASNLAGYYRSNHIMVPMGDDFQYENAYMNYKNMDKLIKYVNERQASGS 318
              :|.||:.||:||:..|.......|:||||..||.||:|:.||..::.:||.|.|||:    ..
plant   258 --FDYNVQERVNDFVAAALAQVNVTRTNHIMWLMGTDFRYQYAYSWFRQIDKFIHYVNK----DG 316

  Fly   319 KYNIFYSTAGCYLNSLHKSLQSFPNKTQDFLPHSHEAKSFWTGFFTSRPTQKRFERDGNHILQVA 383
            :.|:.|||...|.::.:.:.:|:|.||.||.|::.:..::|||:|||||..|::.||.:.....|
plant   317 RLNVLYSTPSIYTDAKYAANESWPLKTDDFFPYADKPNAYWTGYFTSRPAFKKYVRDLSGYYLAA 381

  Fly   384 KQLSVL--ADLSGEEQHKDLDYLRQIMAVMQHHDAITGTEKQEVSNDYDRLLYDAILGGANTARD 446
            :||..|  .|.||    ...|.|...:|:.|||||::||::|.|:.||...|....|........
plant   382 RQLEFLRGRDSSG----PTTDMLADALAIAQHHDAVSGTQRQHVAADYALRLSMGYLQAEKLVAS 442

  Fly   447 ALRVLT--------NQPNGEFQSCLKLNISECAFTKE---NADDFMVTLYNPLAHTSTQYVRVPV 500
            :|..|:        ..|..:||.|..||||.|..::.   :....:|.:||.|.....:.|||||
plant   443 SLSFLSAAKSSTEKKNPGTKFQQCPLLNISYCPASEARLLSGKSLVVVVYNSLGWKREEVVRVPV 507

  Fly   501 KEDSYQVTDEKGGLVASELVPVPWEVLSLEFRN-----------NDT-QHELVFKASVNKI--AT 551
            ..::..|.|..|..|..:|:|:  ..::|..||           .|| :|.|.|.|||..:  ::
plant   508 SSENVIVKDASGKEVVFQLLPL--SEIALRIRNEYVKAYLGRSPRDTAKHVLAFTASVPPLGFSS 570

  Fly   552 YFIKKIDKTTEVDITVNTQTEQSVNEEESNVKVPKRFKKVHSLKTDLETLDDQETIVQNSLIKLV 616
            |.|....:|.. .::.:..|..|:|:   ||:|.:     .:||  |...::...|.::...|..
plant   571 YVISDTGRTAR-GLSASYVTSGSMNQ---NVEVGQ-----GNLK--LRYSEEGVKITRHLSTKNQ 624

  Fly   617 IDNNTGRLKTVEMNGVSEDIDQTFGMYKTARSCHYIFRQDADLEL--VEDAFDFTVYDGESVKEV 679
            :.........:..||..:| .|..|.        |:||.|..|.:  .|:| ..|:..|....||
plant   625 VTAEQSYAYYIGSNGTDKD-PQASGA--------YVFRPDGVLPIKSKEEA-QLTIVQGPLFDEV 679

  Fly   680 HQHVNEWISQVIRIYEGVNRVEFEWLVGPVPIDDELGKEIVTIFKSGISSGGVFYTDSNGREMMR 744
            ||.:|.||||:.|:|:|.|..|.|:.:||:|.||.:.|||:|...:.:.:.|.||||||||:.::
plant   680 HQELNSWISQITRVYKGKNHAEIEFTIGPIPADDGISKEIITKLTTTMKTNGTFYTDSNGRDFIK 744

  Fly   745 REKDKREDFSPDLS-EQPVSGNYYPVTSRMALQDSSKRMVLLNDRSQGGASLEDGRLEMMLHRRH 808
            |.:|.|.|:  ||. .|||:|||||:...:.:||.:..:.:|.||:.||:|||:|::|:|||||.
plant   745 RIRDFRTDW--DLQVYQPVAGNYYPLNLGIYMQDKTSELSVLVDRAVGGSSLENGQIELMLHRRM 807

  Fly   809 IFADGSGAAEAINE----QQFGKGLIARGKLFLYLNAIEDGATASERVAEKEIHLPFWKFFSKSN 869
            ...|..|..|.:||    .:..|||..:||.::.::...||| ...|...:||:.|....|::..
plant   808 QHDDIRGVGEILNETVCLPEGCKGLTIQGKFYVQIDKPGDGA-KWRRTFGQEIYSPLLIAFTEQE 871

  Fly   870 N---IQSDVTKTLSDFN---DLPQSVHLLTLEPYSKDEILLRLENFLDQTEGN----VVSFSIRQ 924
            .   |.|..| |.|.|.   .||::|.||||:.....|:||||.:..:..|.:    :....:::
plant   872 GDSWINSHKT-TFSAFEPSYSLPKNVALLTLQELENGEVLLRLAHLFEVGEDSEYSVMAKVELKK 935

  Fly   925 IFDDLGGLEIRETTLDGNLPLSDM--KRLKFHHDGSGPSHSVPEYFTSLHKPLAADKTQDASEFS 987
            :|.:....|::||:|.||...::|  :||.:..:||.            .:.:...:..||.:..
plant   936 LFHNKKIREVKETSLSGNQEKAEMEKRRLIWKVEGSA------------GEEVKRGEAVDAEKLV 988

  Fly   988 VTLKPMQIRTFIIK 1001
            |.|.||:|||.:||
plant   989 VELVPMEIRTLLIK 1002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManIIINP_001285762.1 GH38N_AMII_LAM_like 37..311 CDD:212121 132/280 (47%)
Alpha-mann_mid 358..433 CDD:286360 32/76 (42%)
Glyco_hydro_38C 603..998 CDD:285047 137/413 (33%)
AT3G26720NP_189306.1 PLN02701 36..997 CDD:178304 364/1013 (36%)
GH38N_AMII_LAM_like 38..314 CDD:212121 133/281 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 310 1.000 Domainoid score I311
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 649 1.000 Inparanoid score I170
OMA 1 1.010 - - QHG55625
OrthoDB 1 1.010 - - D201312at2759
OrthoFinder 1 1.000 - - FOG0001724
OrthoInspector 1 1.000 - - mtm1010
orthoMCL 1 0.900 - - OOG6_101099
Panther 1 1.100 - - O PTHR11607
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1279
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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