DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LManIII and man2b1

DIOPT Version :9

Sequence 1:NP_001285762.1 Gene:LManIII / 34203 FlyBaseID:FBgn0032066 Length:1003 Species:Drosophila melanogaster
Sequence 2:XP_005169420.1 Gene:man2b1 / 541519 ZFINID:ZDB-GENE-050327-52 Length:984 Species:Danio rerio


Alignment Length:1063 Identity:429/1063 - (40%)
Similarity:590/1063 - (55%) Gaps:164/1063 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLALFASYIVQS-----EAVC-YESCPETKSNMINIHLVPHSHDDLGWLKTVDQYYYGNKHNIQH 68
            ||.||...:|.|     .::| |:|||.||.:|:|:|||||:|||:|||||||||:||:::||||
Zfish    11 LLLLFCFSLVFSLPTGRNSICGYKSCPATKPSMLNVHLVPHTHDDVGWLKTVDQYFYGDRNNIQH 75

  Fly    69 AGVQYIFDTVVAELSKDSRRRFIQVETGFFAKWWEDQSETKKKLVKTLVNEGRLEFTGGAWSMND 133
            ||||||.|:|:.:|.||..||||.|||.||.:||..|::..:::|..|||||||||..|.|.|:|
Zfish    76 AGVQYILDSVIDQLQKDPARRFIYVETAFFYRWWRQQNQNTRRIVTQLVNEGRLEFINGGWCMSD 140

  Fly   134 EAAVNYQSVIDQFAVGLKFLNDNFGVCGRPRVGWQIDAFGHSREQASMFAQMAFDGQFFARMDQN 198
            ||..:|.:||||..:||:||||.||.||||||.|.||.|||:||.||:||||.:||.||.|:|..
Zfish   141 EATTHYSAVIDQMTLGLRFLNDTFGECGRPRVAWHIDPFGHAREHASIFAQMGYDGFFFGRLDYQ 205

  Fly   199 DKNKRVDNLGLEMVWDASETLEE--MDFFTGMLYNHYSAPPGFCFDSLCQDDPIIDGKSY-DNNV 260
            ||::|:....:||:|.|||:|..  .|.|||:|.|.|:.|.|||:|..|.|.||.|.... |.||
Zfish   206 DKDRRMKTKEMEMLWRASESLTPPIADLFTGVLPNGYNPPEGFCWDQSCDDAPIRDDPDLEDYNV 270

  Fly   261 KSRVDDFLNYASNLAGYYRSNHIMVPMGDDFQYENAYMNYKNMDKLIKYVNERQASGSKYNIFYS 325
            ...|..|||.:...|.||::|||::.||.|||||||.:.||||||||||||..||.|||.|:.||
Zfish   271 DEIVQKFLNASHKQADYYKTNHIIMTMGSDFQYENANLWYKNMDKLIKYVNALQAKGSKLNVLYS 335

  Fly   326 TAGCYLNSLHKSLQSFPNKTQDFLPHSHEAKSFWTGFFTSRPTQKRFERDGNHILQVAKQLSVL- 389
            |..|||..|:.:..::|.||.||.|::.:|..||||:|||||..|.:||..|..||...||.|| 
Zfish   336 TPSCYLQELNLANFTWPMKTDDFFPYADDAHDFWTGYFTSRPALKLYERLSNSRLQTCNQLEVLG 400

  Fly   390 --ADLSGEEQHKDLDYLRQIMAVMQHHDAITGTEKQEVSNDYDRLLYD-------------AILG 439
              ...||.....|.|.:|:.|.|.|||||::|||||.|:|||.|.|..             |:|.
Zfish   401 GPTSTSGPFGEGDSDTMRRAMGVAQHHDAVSGTEKQHVANDYARRLATGWAHCEVLVSNSLAVLS 465

  Fly   440 GANTARDALRVLTNQPNGEFQSCLKLNISECAFTKENADDFMVTLYNPLAHTSTQYVRVPVKEDS 504
            |:    :|.||.          |..||||.|..| |::..|.:.:||||..|....||:||....
Zfish   466 GS----EAPRVF----------CENLNISVCPLT-ESSHKFSMNVYNPLGRTVRWPVRLPVNGSV 515

  Fly   505 YQVTDEKGGLVASELVPVPWEVLSLEFRNNDTQHELVFKASVNKI--ATYFIKKIDKTTEVDITV 567
            |.|||..|..|.||::|:......:.......:.||||:.....:  :||.|..:.....|..:.
Zfish   516 YNVTDANGKAVDSEVIPLSKSRKEVRQNRGFAKSELVFQVEAPPLGYSTYIISMVQDQPPVSRSK 580

  Fly   568 NTQTEQSVNEEESNVKVPKRFKKVHSLKTDLETLDDQETIVQNSLIKLVIDNNTGRLKTVEMNGV 632
            |.              ||                    :.:||..:|:..|:.||.|.::.....
Zfish   581 NA--------------VP--------------------SSIQNKFLKVTFDSTTGLLSSLTNLET 611

  Fly   633 SEDI--DQTFGMYKTA----RSCH-----YIFR----------QDADLELVEDAFDFTVYDGESV 676
            .:.|  .|.|..|..:    :..|     ||||          :.|:::.|      ::|:  ||
Zfish   612 QQTIRLTQNFFWYNASAGNNKESHQPSGAYIFRPNSSDPFIISKTAEIQAV------SLYN--SV 668

  Fly   677 KEVHQHVNEWISQVIRIYEGVNRVEFEWLVGPVPIDDELGKEIVTIFKSGISSGGVFYTDSNGRE 741
            :||.|..:.|:|||:|:||....:|.||.|||||::|.||||::|...:.|.|.|.|||||||||
Zfish   669 QEVTQRFSPWVSQVVRLYEDRRELELEWTVGPVPVEDGLGKEVITRLDTDIQSSGYFYTDSNGRE 733

  Fly   742 MMRREKDKREDFSPDLSE-QPVSGNYYPVTSRMALQDSSKRMVLLNDRSQGGASLEDGRLEMMLH 805
            ::.|.||.|..:  ||.: :|::|||||:.||..::|..:::.::.|||||.:|:.:|.||:|||
Zfish   734 VLERRKDYRPTW--DLKQTEPIAGNYYPINSRAYIKDDKRQLTVVTDRSQGASSIYNGSLEIMLH 796

  Fly   806 RRHIFADGSGAAEAINEQ-QFGKGLIARGKLFLYLNAIEDGATASERVAEKEIHLPFWKFFSKSN 869
            ||.::.|..|..|.::|. :|..||:|||:|.|.|:..|         |..::|.|.        
Zfish   797 RRLLYDDFRGVGEPLSEPGEFAHGLVARGRLLLTLSPPE---------AAADLHRPL-------- 844

  Fly   870 NIQSDVTKTLSDFND-----------------LPQSVHLLTLEPYSKDEILLRLENFL----DQT 913
             .||.|.:.|..|.|                 ||.:|||||:..:.:|.:|:|||:..    .:|
Zfish   845 -AQSMVLQPLLSFQDGAPSPGTKLEFSGLQAALPPAVHLLTVSQWDQDSVLVRLEHQYQAKESKT 908

  Fly   914 EGNVVSFSIRQIFDDLGGLEIRETTLDGNLPLSDMKRLKFHHDGSGPSHSVPEYFTSLHKPLAAD 978
            ....|:.:::::|..|..|...|.:|..|....||.||.::.:                |.....
Zfish   909 HSQPVTVNLQKLFSTLQVLGASEMSLGANQWKEDMIRLHWNTE----------------KDALPP 957

  Fly   979 KTQDASEFSVTLKPMQIRTFIIK 1001
            ..:|.|.:.||||||:||||:::
Zfish   958 TARDPSSWEVTLKPMEIRTFLLR 980

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManIIINP_001285762.1 GH38N_AMII_LAM_like 37..311 CDD:212121 161/276 (58%)
Alpha-mann_mid 358..433 CDD:286360 41/77 (53%)
Glyco_hydro_38C 603..998 CDD:285047 144/438 (33%)
man2b1XP_005169420.1 PLN02701 44..982 CDD:178304 415/1030 (40%)
GH38N_AMII_LAM_like 44..322 CDD:212121 162/277 (58%)
Alpha-mann_mid 368..446 CDD:214875 41/77 (53%)
Glyco_hydro_38C 558..977 CDD:285047 151/496 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581804
Domainoid 1 1.000 82 1.000 Domainoid score I8330
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55625
OrthoDB 1 1.010 - - D201312at2759
OrthoFinder 1 1.000 - - FOG0001724
OrthoInspector 1 1.000 - - otm24899
orthoMCL 1 0.900 - - OOG6_101099
Panther 1 1.100 - - O PTHR11607
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1279
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.720

Return to query results.
Submit another query.