DRSC/TRiP Functional Genomics Resources

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Protein Alignment LManIII and Man2b2

DIOPT Version :9

Sequence 1:NP_001285762.1 Gene:LManIII / 34203 FlyBaseID:FBgn0032066 Length:1003 Species:Drosophila melanogaster
Sequence 2:NP_001128443.2 Gene:Man2b2 / 360955 RGDID:1308840 Length:1004 Species:Rattus norvegicus


Alignment Length:1110 Identity:279/1110 - (25%)
Similarity:444/1110 - (40%) Gaps:282/1110 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 INIHLVPHSHDDLGWLKTVDQ---YYYGNKHNIQHAGVQYIFDTVVAELSKDSRRRFIQVETGFF 98
            |...:|||||.|:||:.||.:   .|..|           ::.|||.||.:..:||||.||..||
  Rat    27 IRAFVVPHSHMDVGWVYTVQESMRAYAAN-----------VYTTVVEELVRGRQRRFIAVEQEFF 80

  Fly    99 AKWWED-QSETKKKLVKTLVNEGRLEFTGGAWSMNDEAAVNYQSVIDQFAVGLKFLNDNFGVCGR 162
            ..||:. .||.:|:.|:.|::||||||..|...|:|||..:....|.|...|..||.:.||:  |
  Rat    81 RLWWDGVASEQQKQQVRQLLDEGRLEFVLGGQVMHDEAVTHLDDQILQLTEGHGFLYETFGI--R 143

  Fly   163 PRVGWQIDAFGHSREQASMFAQMAFDGQFFARMDQNDKNKRVDNLGLEMVWDASETLEE------ 221
            |:..|.:|.||.|....::||...|:....:|:|.:.|:...:..||:.||..|.:|.|      
  Rat   144 PQFSWHVDPFGASATTPTLFALAGFNAHLISRIDYDLKDAMQEAQGLQFVWHGSPSLSEQQEIYT 208

  Fly   222 --MDFFTGMLYNH--YSAPPGFCFDSLCQ-DDPIIDGKSYDNNVKSRVDDFLNYASNL------- 274
              ||.::....:|  :|...||.::.:.. .:|..||...:.:....||:...||..|       
  Rat   209 HVMDLYSYCTPSHIPFSNRSGFYWNGVAVFPEPPPDGVYPNMSEPVTVDNIHLYAEALVANVKQR 273

  Fly   275 AGYYRSNHIMVPMGDDFQYENAYMNYKNMDKLIKYVNERQASGSKYNIFYSTAGCYLNSLHKSLQ 339
            |.::|:.|::.|.|.|.|:.||.:.:.|||.|::|:|.|.|... .::.|:|...|..:||..  
  Rat   274 AAWFRTPHVLWPWGCDKQFFNASVQFDNMDPLLEYINNRSAQFG-ISVQYATLNDYFQALHDF-- 335

  Fly   340 SFPNKT------QDFLPHSHEAKSFWTGFFTSRPTQKRFERDGNHILQVAKQLSV-------LAD 391
               |.|      .||||:|.|.:..||||||||.|.|...|..:.:|...:.:..       ...
  Rat   336 ---NVTWDIRDHHDFLPYSSEPQQAWTGFFTSRSTLKGLARQASALLYAGESMFTRYMWPHPRGT 397

  Fly   392 LSGEEQHKDLDYLRQIMAVMQHHDAITGTEKQEVSNDYDRLLYDAILGGANTARDALRVLTNQPN 456
            |......:.|..||..::.:||||||||||..:|.|.|   :....:|.....:....:..::|.
  Rat   398 LDPTWALQQLQQLRWAVSEVQHHDAITGTESPKVKNMY---MEHLSMGMRGVHKLMASIALDRPP 459

  Fly   457 GEFQSCLKLNISECAFTKENADDFMVTLYNPLAHTSTQYVRVPVKEDSYQVTDEKGGLVASELV- 520
            |             :.|......:..::|||||...|..:.:.|...|..||||.|..|::::. 
  Rat   460 G-------------SGTDTRPVGYSASVYNPLAWKITTIITLTVAFPSVSVTDELGRPVSAQIQN 511

  Fly   521 ----PVPWEVL------SLEFRNNDTQHELVFKASVNKIAT------YFIKKIDKTTEVDITVNT 569
                |..:::|      .|.:|:...:.....:|...::.|      .|.:|:          ..
  Rat   512 STKDPSAYDLLILTTIPGLSYRHYKVRRTRGDQAGTRELVTPRANTLKFSRKL----------RN 566

  Fly   570 QTEQSVNEEESNVKVPKRFKKVHSLKTDLETLDDQETIVQNSLIKLVIDNNTGRLKTVE--MNGV 632
            ||.|     |..:.||                      |.|....|:.|.:|..|.:::  .:..
  Rat   567 QTSQ-----EGKLLVP----------------------VMNDCYTLLFDQDTNMLHSIQDRQSNR 604

  Fly   633 SEDIDQTFGMYKT-------ARSCHYIFRQDADLELVEDAFDFTVYDGESVKEVHQHVNEWISQV 690
            :..:.|.|..|:.       ..|.:|:|..:...|...:|....:..|....:|.|:....|:..
  Rat   605 TVHMTQEFLEYRANGDVKQGPISDNYLFASNDTAEPSWEAVGMEMVVGTLATDVRQYFYRNITDQ 669

  Fly   691 IRIYE-------------G---VNRVEFEWLVGPVPIDDELGKEIVTIFKSGISSGGVFYTDSNG 739
            ..||.             |   ..|:|.::.|||:    :|.:|.:....|.::|..|.|:|:||
  Rat   670 GYIYSIHTRLAHVHPSLAGELLCRRIEQQYQVGPL----DLNREAILRTSSDLNSQQVLYSDNNG 730

  Fly   740 REMMRREKDKREDFSPDLSEQPVSGNYYPVTSRMALQDSSKRMVLLNDRSQGGASLEDGRLEMML 804
            .:|.||....       ....|:..||||:.....::|...|:|||.:|..|.:|.|:|::|:||
  Rat   731 YQMQRRPYKA-------FKSNPIPRNYYPMVQSAFIEDDKSRLVLLAERPHGVSSQENGQVEVML 788

  Fly   805 HRRHIFADGSGAAEAINEQQFGKGLIARGKLFLYLNAIED---GATASERVAEKEIHLPFWKFFS 866
            |||                             |:.|.:.|   ..|.::   ...:|...|....
  Rat   789 HRR-----------------------------LWNNLVWDLNYNLTLND---TSVVHPVLWLLLG 821

  Fly   867 KSNNI-----QSDVT---------KTLSDFND-------------LPQSVHLLTLE----PYSKD 900
            ..:..     :|.|.         |.|:|..:             ||.|:||..|.    .||::
  Rat   822 PKSTTTALRPRSGVALQHRPVVLLKELTDEEETAIHRPHHPWPVTLPPSLHLQVLSLPGWQYSRN 886

  Fly   901 ---------------------EILLRLENFLDQTEGNVVS----FSIRQIFDDLGG-LEIRETTL 939
                                 .:||||.:..:..|..|:|    ..::.....||. :.:.|.:|
  Rat   887 HAQHLKNLQRGHPEKPQVNLQRVLLRLHHLYEAGEDPVLSRPATVDLKIALRGLGSVVAVEERSL 951

  Fly   940 DGNLPLSDMKR---------LKFHHDGSGPSHSVPEYFTSLHKPLAADKTQDASEFSVTLKPMQI 995
            .|...:..::|         ||.|                   |.:..::...|  .:|:.|.:|
  Rat   952 TGTWDVQTLQRWHWRTKIGQLKGH-------------------PTSPPRSPGGS--IITVYPKEI 995

  Fly   996 RTFII 1000
            |||.|
  Rat   996 RTFFI 1000

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManIIINP_001285762.1 GH38N_AMII_LAM_like 37..311 CDD:212121 99/295 (34%)
Alpha-mann_mid 358..433 CDD:286360 29/81 (36%)
Glyco_hydro_38C 603..998 CDD:285047 100/488 (20%)
Man2b2NP_001128443.2 PLN02701 27..792 CDD:178304 235/876 (27%)
GH38N_AMII_Epman_like 27..352 CDD:212122 113/343 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D201312at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11607
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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