DRSC/TRiP Functional Genomics Resources

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Protein Alignment LManIII and aman-3

DIOPT Version :9

Sequence 1:NP_001285762.1 Gene:LManIII / 34203 FlyBaseID:FBgn0032066 Length:1003 Species:Drosophila melanogaster
Sequence 2:NP_001361919.1 Gene:aman-3 / 172178 WormBaseID:WBGene00018594 Length:1046 Species:Caenorhabditis elegans


Alignment Length:1053 Identity:245/1053 - (23%)
Similarity:439/1053 - (41%) Gaps:214/1053 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LFASYIVQSEAVCYESCPETKSNMINIHLVPHSHDDLGWLKTVDQYYYGNKHNIQHAGVQYIFDT 77
            ||.|.:.:...:...| .::::..:.::::|.:|.|.|||:|.::|   .|...|      |.|.
 Worm    96 LFESVVAKGNTLPPAS-KKSRTEKLKVYVLPFTHVDPGWLETFERY---TKSTNQ------ILDN 150

  Fly    78 VVAELSKDSRRRFIQVETGFFAKWWEDQSETKKKLVKTLVNEGRLEFTGGAWSMNDEAAVNYQSV 142
            :...:.|:.:.||:..|..||.:||..|:|..|:.||.||.|||||...|:|.|.|||...:...
 Worm   151 MHQFMMKNEKMRFMWAEFVFFERWWSLQNEQVKEDVKKLVTEGRLELATGSWVMTDEANPYFPVS 215

  Fly   143 IDQFAVGLKFLNDNFGVCGRPRVGWQIDAFGHSREQASMFAQMAFDGQFFARMDQNDKNKRVDNL 207
            :|....|.:|::.|||:  :|:..|..|.||:|.....:|.:.........|:....|.......
 Worm   216 VDNIVEGFQFIHKNFGI--KPQTMWSNDPFGYSNSVPYLFKKSGVHRTVINRIHHKLKQTLQSQK 278

  Fly   208 GLEMVW----DASETLEEMDFFTGML-YNHYSAPPGFCFDSL--CQDDPII-------------- 251
            .:...|    ||:   .|.|..|.:| |.||        |.|  |..|..:              
 Worm   279 AIPFKWRQYFDAT---GEDDVLTQILPYTHY--------DILNSCGSDASVCCEFDFKRMTHWSC 332

  Fly   252 ----DGKSYDNNVKSRVDDFLNYASNLAGYYRSNHIMVPMGDDFQY---ENAYMNYKNMDKLIKY 309
                ..|..:.||.::.:..:|....::..|::..|::..||||::   |.....:.|...:...
 Worm   333 PGPKPEKITNANVAAKAEKLVNQLEKMSEMYKAPVILMMHGDDFRFDMIEEWNQQHDNFIPVFDE 397

  Fly   310 VNERQASGSKYNIFYSTAGCYLNSLHKSLQSF-----PNKTQDFLPHSHEAKSFWTGFFTSRPTQ 369
            :|:    ||:..|.:.|...|.|.|.|...:.     |..:.||.|:......:|||::|:||..
 Worm   398 INK----GSRVEIRFGTFTDYFNDLEKWYSNNKDSEPPTVSGDFFPYMCALGDYWTGYYTTRPFF 458

  Fly   370 KR-------FERDGNHILQV----AKQLSVLADLSGEEQHKDLDYLRQIMAVMQHHDAITGTEKQ 423
            ||       ..|:|:.:|.:    .||..:      .|..|.|:..|:.:|:.|||||||||.|.
 Worm   459 KRQGRLLHSLIRNGDIMLSMLRVNLKQRKI------GENVKRLEAARRNLALFQHHDAITGTSKV 517

  Fly   424 EVSNDYDRLLYDAILGG----ANTARDALRVLTNQPNG-EFQSCLKLNISECAFTKENADDFMVT 483
            .|.::|..||:.:|:..    .|..:..:.:.....:| |.|:.:.|..||    ||      :.
 Worm   518 SVMDNYSELLHASIVSTNIVLENLTKSDIDLYPRIHDGIELQTIVDLESSE----KE------IR 572

  Fly   484 LYNPLAHTSTQYVRVPVKEDSYQVTDEKGGLVASELVPVPWEVLSLEFRNNDTQHE---LVFKAS 545
            ::|......|...::.|||....|:.: |.::.::|.|.        |:.:..:.:   |:|:|:
 Worm   573 IFNSHLFEITDVFKIRVKEREVIVSID-GKIIEAQLEPF--------FQKSKVEKDSFLLLFQAT 628

  Fly   546 VNKIATYFIKKIDKTTEVDITVNTQTEQSVNEEESNVKVPKRFKKVHSLKTDLETLDDQETI--- 607
            |..::...: |:.:.....:|                    :..|:.:..|:...|....||   
 Worm   629 VLPLSMMKV-KVQRGDSGGLT--------------------KMAKIEAKDTNAWDLGSSWTIASS 672

  Fly   608 -----VQNSLIKLVIDNNTGRLKTVEMNGVSED----IDQTFGMYKTARSCHYIFRQDAD-LELV 662
                 ::....|:..|..||.:::|  |.:|::    ..|:|..||.|....|:.|...: .|::
 Worm   673 TSAPNLETPYFKVSNDPITGAIQSV--NKLSDNSKFHCQQSFYNYKEAGGGAYLMRLHTNPKEII 735

  Fly   663 EDAFDFTVYDGESVKEVHQHVNEWISQV-IRIYEGVNRVEFEWLVGPVPIDDELGKEIVTIFKSG 726
            |  :.:....|...:.::|.....:.:: |...||.:..|.: :...:.|..|...|::|.|.:.
 Worm   736 E--YQWLKVSGPLRQSIYQKSTNVLQRLSIHNVEGPSGEEVD-ISMSIDITKERNTELMTRFSTK 797

  Fly   727 ISSGGVFYTDSNGREMMRREKDKREDFSPDLSEQPVSGNYYPVTSRMALQDSSKRMVLLNDRSQG 791
            ... .:.||||.|.:::||          |..:.||..||||:.:...||...:|:.::::...|
 Worm   798 WDK-PLTYTDSVGMQLLRR----------DFYKLPVQSNYYPMPTAAVLQSGKQRLSIVSNVEHG 851

  Fly   792 GASLEDGRLEMMLHRRHIFADGSGAAEAINEQQFGKGLIARG-------------KLFLYLNAIE 843
            ...||.|.:|:.:.|             |..|..|||| ..|             |..|..:::|
 Worm   852 ARFLESGTVEINIDR-------------ILNQDDGKGL-GTGPDAIPIDMKPVDMKFKLIFDSLE 902

  Fly   844 DGATASER----------VAEKEIHLPFWKFFSKSNNIQSDVTKTLSDFNDL--PQSVHLLTLEP 896
            ...|.:.|          ..:..|:.|.  .|::....:.|: :.:.:.::|  |..:.|||:.|
 Worm   903 SDPTENSRYSTHSFRAQQAVQTIIYPPM--MFNRPPKKEEDI-EEIEEISNLKFPCDIQLLTVRP 964

  Fly   897 YSKDEILLRLENFL----DQTEGNV---VSFSIRQIFDDLGGLEIRETTLDGNLPLSDMKRLKFH 954
            ...::.||.|....    .|..||.   :..|:..:...||..::::|.|.|...:..:.:::: 
 Worm   965 LEDNKQLLILYRHATVCSSQKVGNCGGELKSSLMDLLIKLGAKQVQKTDLSGVTRVGGIIKVEY- 1028

  Fly   955 HDGSGPSHSVPEY 967
                     :|:|
 Worm  1029 ---------LPDY 1032

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManIIINP_001285762.1 GH38N_AMII_LAM_like 37..311 CDD:212121 79/301 (26%)
Alpha-mann_mid 358..433 CDD:286360 30/85 (35%)
Glyco_hydro_38C 603..998 CDD:285047 88/411 (21%)
aman-3NP_001361919.1 PLN02701 117..978 CDD:178304 230/965 (24%)
GH38N_AMII_GMII_SfManIII_like 118..452 CDD:212120 95/359 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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