DRSC/TRiP Functional Genomics Resources

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Protein Alignment PrBP and pdl-1

DIOPT Version :10

Sequence 1:NP_609246.1 Gene:PrBP / 34196 FlyBaseID:FBgn0032059 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_495490.1 Gene:pdl-1 / 191741 WormBaseID:WBGene00003966 Length:159 Species:Caenorhabditis elegans


Alignment Length:141 Identity:76/141 - (53%)
Similarity:106/141 - (75%) Gaps:0/141 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DRIQKGFQINYMILRDADSGKIIWQENKDFSAPDQEHEARVPVKILDMRAVSREINFSTIESMEN 74
            :.|..||::|:|.||||::||::||..:|.:.|.:||:|.||..:|..|.|||||||::...:|.
 Worm    18 ESILAGFKLNWMNLRDAETGKVLWQSTEDMADPKREHKAHVPKNLLKCRTVSREINFTSSVKIEK 82

  Fly    75 FRLDQKVLFKGRIMEEWFFEMGFVGANTTNTWQSTIEAAPESQMMPAKVLNGNVTIQTSFYDNET 139
            |||:|:|..||.|:|||:|:.|||..::|||||:.|||||||||.|..||:|||.::|.|||.:.
 Worm    83 FRLEQRVYLKGTIIEEWYFDFGFVIPDSTNTWQNMIEAAPESQMFPPSVLSGNVVVETLFYDGDL 147

  Fly   140 LITKSVVRLYY 150
            |::.|.|||||
 Worm   148 LVSTSRVRLYY 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrBPNP_609246.1 GMP_PDE_delta 11..150 CDD:428436 74/138 (54%)
pdl-1NP_495490.1 GMP_PDE_delta 20..158 CDD:428436 74/137 (54%)

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