DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glt and GID1A

DIOPT Version :9

Sequence 1:NP_001245946.1 Gene:Glt / 34193 FlyBaseID:FBgn0001114 Length:1026 Species:Drosophila melanogaster
Sequence 2:NP_187163.1 Gene:GID1A / 819674 AraportID:AT3G05120 Length:345 Species:Arabidopsis thaliana


Alignment Length:157 Identity:42/157 - (26%)
Similarity:64/157 - (40%) Gaps:46/157 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 LDIYAPEGANQLPVLVFVHGEMLFDGGSEEAQPDYVLEKDV-----LLVSINYRLAPFGFLSALT 207
            ||:..|...:.:||::|.||.......:..|..|.:..:.|     ::||:|||.||        
plant    95 LDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAP-------- 151

  Fly   208 DELPGNVALSDLQLALEWL---------QRNVVHFGGNAGQVTLVGQAGGATLAHALSLSGRAGN 263
             |.|...|..|..:||.|:         :.:.||       :.|.|.:.|..:||.::|  ||| 
plant   152 -ENPYPCAYDDGWIALNWVNSRSWLKSKKDSKVH-------IFLAGDSSGGNIAHNVAL--RAG- 205

  Fly   264 LFQQLILQSG------TALNPYLIDNQ 284
                   :||      ..|||....|:
plant   206 -------ESGIDVLGNILLNPMFGGNE 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GltNP_001245946.1 COesterase 55..579 CDD:278561 42/157 (27%)
Aes <146..345 CDD:223730 42/157 (27%)
RILP-like <677..>717 CDD:304877
GID1ANP_187163.1 Abhydrolase_3 109..322 CDD:400284 37/143 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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