DRSC/TRiP Functional Genomics Resources

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Protein Alignment Glt and LOC688542

DIOPT Version :9

Sequence 1:NP_001245946.1 Gene:Glt / 34193 FlyBaseID:FBgn0001114 Length:1026 Species:Drosophila melanogaster
Sequence 2:XP_038954018.1 Gene:LOC688542 / 688542 RGDID:1587637 Length:559 Species:Rattus norvegicus


Alignment Length:579 Identity:154/579 - (26%)
Similarity:238/579 - (41%) Gaps:126/579 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 QPQEAVVQAPEVGQILGISGHKTIANRPVNAFLGIRYGTVGGGLARF---QAAQPIGYQGRVNAT 117
            |...:.::....||:.|...|....:..|:.||||.:.....|..||   :|.:|  :.|..:||
  Rat    27 QDSASPIRNTHTGQVRGSLVHVKDTDIDVHTFLGIPFAKPPVGPLRFAPPEAPEP--WSGVRDAT 89

  Fly   118 VQSPNCAQFPE-------------LDRLRLSESRGENVDDCLTLDIYAP----EGANQLPVLVFV 165
            .....|.|...             |..:.:||       |||.|:||||    ||:| |||:|::
  Rat    90 SHPAMCLQNDNMMGSEDMKIMKLILPPISMSE-------DCLYLNIYAPTHAHEGSN-LPVMVWI 146

  Fly   166 HGEML-------FDGGSEEAQPDYVLEKDVLLVSINYRLAPFGFLSALTDELPGNVALSDLQLAL 223
            ||..|       :||....|      .:||::|:|.|||...||.|...:...||....|...||
  Rat   147 HGGALTVGMASMYDGSMLAA------TEDVVVVTIQYRLGVLGFFSTGDEHARGNWGYLDQVAAL 205

  Fly   224 EWLQRNVVHFGGNAGQVTLVGQAGGATLAHALSLSGRAGNLFQQLILQSGTALNPYLIDNQPLDT 288
            .|:|:|:.|||||..:||:.|::.|.|...:..:|..:..||...|::||..:.|.||.......
  Rat   206 RWVQQNIAHFGGNPNRVTIFGESAGGTSVSSHVVSPMSQGLFHGAIMESGVVVLPDLISRSSEMV 270

  Fly   289 LSTFARLARCPPPSINPSAQGLKPLYDCLARLPTSQLVAAFEQLLLQNEHLGLTQLGGFKLVVGD 353
            ....|.|:.|       :|...:.|..||.....:::             |.:.::  ||::...
  Rat   271 YRIVANLSGC-------AAVDSETLMQCLRGKSEAEI-------------LDINKV--FKIIPAV 313

  Fly   354 PLG-FLPSHPASLATNSSL-ALPMIIGATKDASAFIVSRIYDQLARLQSRNVSDYIDVVLRHTAP 416
            ..| |||.||..|..:::. .:|.|||...|...:|:..|:|...:         |:.:.|.|.|
  Rat   314 VDGEFLPKHPQELLASANFHRVPSIIGINNDEYGWILPMIFDSAQK---------IEEITRKTLP 369

  Fly   417 PSEHRLWKQWALREIFTP-----IQEQ----TASLQTVAPGLLELSNYILYRAPVINSISQSYRS 472
                .:.|..||:.:..|     :.|:    |...:|:.....|:....::..|.: .::...||
  Rat   370 ----TVLKSTALKMMLPPECGDLLMEEYMGDTEDPKTLQAQFREMMGDFMFVIPAL-QVAHFQRS 429

  Fly   473 -VPAYLYTFDYRGEHHRFGHLSNPLPFGVDASLSDDSVYL----------FPYPPEASRLNPLDR 526
             .|.|.|.|     .||.....:..|..|.|...|: |:|          ||:..|       :.
  Rat   430 HAPVYFYEF-----QHRSSFFKDVKPPHVKADHGDE-VFLVFGYLVGDIKFPHTEE-------EE 481

  Fly   527 SLSRALVTMWVNFATTGVPNPSSGV--WPQATSEYGPFLRFTNNQQSPLELDPHFGEGI 583
            .|||.::..|.|||..|.|| |.|:  ||....:         :|...|::.|..|..:
  Rat   482 LLSRKIMKYWANFARHGNPN-SEGLPHWPVMDHD---------DQYLQLDIQPSVGRAL 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GltNP_001245946.1 COesterase 55..579 CDD:278561 153/573 (27%)
Aes <146..345 CDD:223730 64/209 (31%)
RILP-like <677..>717 CDD:304877
LOC688542XP_038954018.1 COesterase 30..538 CDD:395084 153/576 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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