DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glt and Ces1a

DIOPT Version :9

Sequence 1:NP_001245946.1 Gene:Glt / 34193 FlyBaseID:FBgn0001114 Length:1026 Species:Drosophila melanogaster
Sequence 2:NP_001177304.1 Gene:Ces1a / 679817 RGDID:1583671 Length:563 Species:Rattus norvegicus


Alignment Length:542 Identity:150/542 - (27%)
Similarity:229/542 - (42%) Gaps:92/542 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 PQEAVVQAPEVGQILGISGHKTIANRPVNAFLGIRYGTVGGGLARFQAAQPIGYQGRV-NATVQS 120
            |....:|...:|:.:.:.|.    .:||..|||:.:.....|..||...||......| |||...
  Rat    24 PVVDTLQGKVLGKYISLEGF----TQPVAVFLGVPFAKPPLGSLRFAPPQPAESWSFVKNATSYP 84

  Fly   121 PNCAQFPELDRLRLSE---SRGENV-----DDCLTLDIYAP---EGANQLPVLVFVHGEMLFDGG 174
            |.|:|...:..: |||   ::.|||     :|||.|:||:|   ...::|||:|:|||..|..||
  Rat    85 PMCSQITGVGPV-LSEVFTNQLENVPLEYSEDCLYLNIYSPTDLTSKDRLPVMVWVHGGGLLSGG 148

  Fly   175 SE--EAQPDYVLEKDVLLVSINYRLAPFGFLSALTDELPGNVALSDLQLALEWLQRNVVHFGGNA 237
            :.  :.......|| |::|.|.|||..:||||...:...||....|...||:|:|.|:|:|||:.
  Rat   149 ASTFDGLALSTHEK-VVVVVIQYRLGIWGFLSTGDEHSRGNWGHFDQVAALQWVQNNIVNFGGDP 212

  Fly   238 GQVTLVGQAGGATLAHALSLSGRAGNLFQQLILQSGTALNPYLIDNQPLDTLSTFARLARCPPPS 302
            ..|||.|::.|......|.||....|||.:.|.:||.||.|.|............|....|    
  Rat   213 NSVTLFGESAGGESVSVLVLSPLTKNLFHRAISESGVALTPCLFRENTRLAAEQVAIATGC---- 273

  Fly   303 INPSAQGLKPLYDCLARLPTSQLVAAFEQLLLQNEHLGLTQLGG------FKLVVGDPLGFLPSH 361
               :|.....:..||......:|:|.    .|:.:...|...|.      |...|.|.: .||..
  Rat   274 ---AATTSADIVRCLREKTEEELLAT----TLKMKFFALDLHGDPRESYPFLTTVIDGV-LLPKA 330

  Fly   362 PASLATNSSL-ALPMIIGATKDASAFIVSRIYDQLARLQSRNVSDYIDVVLRHTAPPSEHR---- 421
            |..:.:..:. .:|.|:|..|....:                   :|..::.:  |.||.:    
  Rat   331 PEEILSEKNFNTVPYIVGINKQEFGW-------------------FIPTMMGY--PLSESKLDQK 374

  Fly   422 -----LWKQWALREI---FTPIQEQTASLQTVAPG-----LLELSNYILYRAPVINSISQSYRSV 473
                 |||.:.|..|   .||:..:.....:..|.     .|::...:|:..|.: .:::.:|..
  Rat   375 TATSLLWKSYPLTNISKELTPVATEKYLGGSDCPDKKKDLFLDMMGDVLFAVPSV-IVARYHRDA 438

  Fly   474 PA--YLYTFDYRGEHHRFGHLSNPLPFGVDASLSDD--SVYLFPYPPEASRLNPLDRSLSRALVT 534
            .|  |:|.|.|   |..|  :|:..|..|.|...|:  ||:..|:..|.:....:  :||..::.
  Rat   439 RATTYVYEFKY---HPSF--VSDMRPKTVIADHGDEVYSVWGTPFLKEGASEEEI--NLSTMMMK 496

  Fly   535 MWVNFATTGVPNPSSGV--WPQ 554
            .|.|||..|.|| ..|:  ||:
  Rat   497 FWGNFARNGNPN-GEGLPHWPE 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GltNP_001245946.1 COesterase 55..579 CDD:278561 150/542 (28%)
Aes <146..345 CDD:223730 66/203 (33%)
RILP-like <677..>717 CDD:304877
Ces1aNP_001177304.1 COesterase 24..545 CDD:278561 150/542 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336504
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D206516at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.850

Return to query results.
Submit another query.