DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glt and tg

DIOPT Version :10

Sequence 1:NP_477504.1 Gene:Glt / 34193 FlyBaseID:FBgn0001114 Length:1026 Species:Drosophila melanogaster
Sequence 2:NP_001316794.1 Gene:tg / 567631 ZFINID:ZDB-GENE-030519-1 Length:2733 Species:Danio rerio


Alignment Length:647 Identity:164/647 - (25%)
Similarity:255/647 - (39%) Gaps:161/647 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 VQAPEVGQILGISGHKTIA---NRPVNAFLGIRYGTVGGGLARFQAAQPIGYQGRVNATVQSPNC 123
            |..|:.|.:||.|..|.|.   ::.|..|||:.|.....|..||...||..:.|..|||....:|
Zfish  2166 VSIPDHGTLLGESEVKPITGSDSKRVTYFLGVPYARPPIGDLRFSPPQPADWTGTWNATFFRSSC 2230

  Fly   124 AQFPELDRLRLSESRGENVDDCLTLDIY-APEGANQLPVLVFVH--GEMLFDGGSEEAQPDYVLE 185
            .|..:|.....||       |||.|::: |...|...|||||.|  |..|.||....|      .
Zfish  2231 LQPGDLTDSSSSE-------DCLYLNVFVASSVAKNAPVLVFFHNSGSDLLDGSYLAA------V 2282

  Fly   186 KDVLLVSINYRLAPFGFLSALTDELPGNVALSDLQLALEWLQRNVVHFGGNAGQVTLVGQAGGAT 250
            .::::|:.::|:|.||||||.:..||||..|.|...||.|:|:|:..|||:..:||:..:..||.
Zfish  2283 GNIIVVTASFRMAAFGFLSAGSSALPGNYGLQDQAAALGWVQKNIALFGGDPTKVTVGAERNGAD 2347

  Fly   251 LAHALSLSGRAGNLFQQLILQSGTALNPYLI--DNQPLDTLSTFARLARCPPPSINPSAQGLKPL 313
            :|.....|..|.:||.:.:|..|:..:|.::  .::.....|:.||...|  .:.:||     .|
Zfish  2348 IASLHLTSPSASSLFSRALLMGGSVFSPAVVMSSSKAQAQTSSLARELDC--QAADPS-----QL 2405

  Fly   314 YDCLARLPTSQLVAAFEQLLLQNEHLGLTQLGGFKLVVGDPLGFLPS--------HPASLATNSS 370
            .|||...|...:.||..:||..:..|....    .:|.|:.:..:||        |.|.:...||
Zfish  2406 LDCLRSKPAHSINAAQTKLLAVSGPLQAWS----PVVDGNVVREMPSVALQSGRFHKAEILLGSS 2466

  Fly   371 L-----------------------------ALPMIIGATKDASAFI---VSRIYDQLARLQSRNV 403
            .                             ||...:|. .||:||:   .:..|.          
Zfish  2467 FEDGLISRAKNIKNFEQLQGRADSKTAFYAALSNSLGG-DDANAFVKEAATWFYS---------- 2520

  Fly   404 SDYIDVVLRHTAPPSEHRLWKQWALREIFTPIQEQTASLQTVAPGLLELSNYILYRAPVINSISQ 468
                   |:|:..||.:.::.:        .::..|..|..:.| .::::.:  :.|.....:  
Zfish  2521 -------LQHSPTPSGYNVFSR--------ALENATRDLFIICP-TVDMAEF--WAANTQTGV-- 2565

  Fly   469 SYRSVPAYLYTFDYRGEHHRFGHL-SNPLPFGVDASLSDDSVYLFPYPPEASR---LNPLDRSLS 529
                   |:|            || .|.....||.|:..|..|||..|..|.:   .:..:::.:
Zfish  2566 -------YMY------------HLPENAAYNSVDLSVPMDVQYLFGVPLAAEQRDLFSYKEKTFT 2611

  Fly   530 RALVTMWVNFATTGVPNPSSGVWPQATS--EYGPFLRFTNNQQSPL-ELDPHFGEGIY------L 585
            ..::....||..:|.||     .|.|.|  .:|.||       .|. :..||.|...|      |
Zfish  2612 LQIMNYMANFIKSGNPN-----LPLAASRTSFGKFL-------PPWPQFMPHVGGRAYKELSSTL 2664

  Fly   586 PNYRVIYKPTTNF----SPPITTTTT---------TTTTTTTTSRPYAYNPYANWQNRPSQQ 634
            .|.:.:.:...:|    .|.:|::|.         .|...|.|..|....| |::...||:|
Zfish  2665 VNRKNLQRSQCSFWSQYVPALTSSTAKFSCGTSAEETGVQTPTQEPKPLTP-ASFTLTPSRQ 2725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GltNP_477504.1 COesterase 58..579 CDD:395084 146/571 (26%)
Casc1_N 681..>717 CDD:464947
tgNP_001316794.1 Thyroglobulin_1 40..98 CDD:459665
Thyroglobulin_1 102..161 CDD:459665
TY 165..249 CDD:469630
TY 301..358 CDD:238114
TY <594..639 CDD:238114
Thyroglobulin_1 643..705 CDD:459665
TY 990..1047 CDD:238114
TY 1133..1194 CDD:469630
Ephrin_rec_like 1425..1470 CDD:429604
COesterase 2172..2678 CDD:395084 149/591 (25%)
Blue background indicates that the domain is not in the aligned region.

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