DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glt and tg

DIOPT Version :9

Sequence 1:NP_001245946.1 Gene:Glt / 34193 FlyBaseID:FBgn0001114 Length:1026 Species:Drosophila melanogaster
Sequence 2:NP_001316794.1 Gene:tg / 567631 ZFINID:ZDB-GENE-030519-1 Length:2733 Species:Danio rerio


Alignment Length:647 Identity:164/647 - (25%)
Similarity:255/647 - (39%) Gaps:161/647 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 VQAPEVGQILGISGHKTIA---NRPVNAFLGIRYGTVGGGLARFQAAQPIGYQGRVNATVQSPNC 123
            |..|:.|.:||.|..|.|.   ::.|..|||:.|.....|..||...||..:.|..|||....:|
Zfish  2166 VSIPDHGTLLGESEVKPITGSDSKRVTYFLGVPYARPPIGDLRFSPPQPADWTGTWNATFFRSSC 2230

  Fly   124 AQFPELDRLRLSESRGENVDDCLTLDIY-APEGANQLPVLVFVH--GEMLFDGGSEEAQPDYVLE 185
            .|..:|.....||       |||.|::: |...|...|||||.|  |..|.||....|      .
Zfish  2231 LQPGDLTDSSSSE-------DCLYLNVFVASSVAKNAPVLVFFHNSGSDLLDGSYLAA------V 2282

  Fly   186 KDVLLVSINYRLAPFGFLSALTDELPGNVALSDLQLALEWLQRNVVHFGGNAGQVTLVGQAGGAT 250
            .::::|:.::|:|.||||||.:..||||..|.|...||.|:|:|:..|||:..:||:..:..||.
Zfish  2283 GNIIVVTASFRMAAFGFLSAGSSALPGNYGLQDQAAALGWVQKNIALFGGDPTKVTVGAERNGAD 2347

  Fly   251 LAHALSLSGRAGNLFQQLILQSGTALNPYLI--DNQPLDTLSTFARLARCPPPSINPSAQGLKPL 313
            :|.....|..|.:||.:.:|..|:..:|.::  .::.....|:.||...|  .:.:||     .|
Zfish  2348 IASLHLTSPSASSLFSRALLMGGSVFSPAVVMSSSKAQAQTSSLARELDC--QAADPS-----QL 2405

  Fly   314 YDCLARLPTSQLVAAFEQLLLQNEHLGLTQLGGFKLVVGDPLGFLPS--------HPASLATNSS 370
            .|||...|...:.||..:||..:..|....    .:|.|:.:..:||        |.|.:...||
Zfish  2406 LDCLRSKPAHSINAAQTKLLAVSGPLQAWS----PVVDGNVVREMPSVALQSGRFHKAEILLGSS 2466

  Fly   371 L-----------------------------ALPMIIGATKDASAFI---VSRIYDQLARLQSRNV 403
            .                             ||...:|. .||:||:   .:..|.          
Zfish  2467 FEDGLISRAKNIKNFEQLQGRADSKTAFYAALSNSLGG-DDANAFVKEAATWFYS---------- 2520

  Fly   404 SDYIDVVLRHTAPPSEHRLWKQWALREIFTPIQEQTASLQTVAPGLLELSNYILYRAPVINSISQ 468
                   |:|:..||.:.::.:        .::..|..|..:.| .::::.:  :.|.....:  
Zfish  2521 -------LQHSPTPSGYNVFSR--------ALENATRDLFIICP-TVDMAEF--WAANTQTGV-- 2565

  Fly   469 SYRSVPAYLYTFDYRGEHHRFGHL-SNPLPFGVDASLSDDSVYLFPYPPEASR---LNPLDRSLS 529
                   |:|            || .|.....||.|:..|..|||..|..|.:   .:..:::.:
Zfish  2566 -------YMY------------HLPENAAYNSVDLSVPMDVQYLFGVPLAAEQRDLFSYKEKTFT 2611

  Fly   530 RALVTMWVNFATTGVPNPSSGVWPQATS--EYGPFLRFTNNQQSPL-ELDPHFGEGIY------L 585
            ..::....||..:|.||     .|.|.|  .:|.||       .|. :..||.|...|      |
Zfish  2612 LQIMNYMANFIKSGNPN-----LPLAASRTSFGKFL-------PPWPQFMPHVGGRAYKELSSTL 2664

  Fly   586 PNYRVIYKPTTNF----SPPITTTTT---------TTTTTTTTSRPYAYNPYANWQNRPSQQ 634
            .|.:.:.:...:|    .|.:|::|.         .|...|.|..|....| |::...||:|
Zfish  2665 VNRKNLQRSQCSFWSQYVPALTSSTAKFSCGTSAEETGVQTPTQEPKPLTP-ASFTLTPSRQ 2725

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GltNP_001245946.1 COesterase 55..579 CDD:278561 146/571 (26%)
Aes <146..345 CDD:223730 66/203 (33%)
RILP-like <677..>717 CDD:304877
tgNP_001316794.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575631
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.930

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