DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glt and nlgn3b

DIOPT Version :9

Sequence 1:NP_001245946.1 Gene:Glt / 34193 FlyBaseID:FBgn0001114 Length:1026 Species:Drosophila melanogaster
Sequence 2:XP_005165239.1 Gene:nlgn3b / 567415 ZFINID:ZDB-GENE-060526-197 Length:846 Species:Danio rerio


Alignment Length:685 Identity:161/685 - (23%)
Similarity:255/685 - (37%) Gaps:182/685 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 PEVGQILG-ISGHK-TIANR---PVNAFLGIRYGTVGGGLARFQAAQ-PIGYQGRVNATVQSPNC 123
            |.|...|| :.|.: .:|..   ||:.:||:.|.....|..||.... |..:.|..|||...|.|
Zfish    46 PTVNTALGRLRGMRVAVATEGLGPVDQYLGVPYAAPPVGEKRFMPPDAPSAWSGVRNATRFPPVC 110

  Fly   124 AQ-----FPEL--------DRLRLSESRGENVDDCLTLDIYAP--EGANQL-------------- 159
            .|     .|::        :...::....|..:|||.::||.|  .|..:.              
Zfish   111 PQTVRNAVPDIMMPVWATYNMDTVATYLQEQSEDCLYMNIYVPTQSGTKRTGDMSADTERTEDDG 175

  Fly   160 ---------PVLVFVHGEMLFDG------GSEEAQPDYVLEK--DVLLVSINYRLAPFGFLSALT 207
                     ||::|:||....:|      ||       ||..  :|:::::|||:...||||...
Zfish   176 LRDSRDDPRPVMLFIHGGSYMEGTGNIMDGS-------VLASYGNVIVITLNYRVGILGFLSTGD 233

  Fly   208 DELPGNVALSDLQLALEWLQRNVVHFGGNAGQVTLVGQAGGATLAHALSLSGRAGNLFQQLILQS 272
            ....||..|.|...||.|:.:|:.:|||:.|:||:.|...||:....|:||..:..||.:.|:||
Zfish   234 QAAKGNYGLLDQIQALRWINKNIGYFGGDPGRVTVFGSGIGASCVSLLTLSHHSEGLFHRAIIQS 298

  Fly   273 GTALNPYLIDNQPLDTLSTFARLARCPPPSINPSAQGLKPLYDCLARLPTSQLVAAFEQLLLQNE 337
            |:||:.:.::.||:......|....|       :....:.|..|:.:....:||.  :::.....
Zfish   299 GSALSSWSVNYQPVKYTRLLAERVGC-------NVLDTQDLVLCMQKRSYRELVE--QEIQPARF 354

  Fly   338 HLGLTQLGGFKLVVGDP-----LGFLPSHPASLATNSSLALPMIIGATKDASAFIVSRIYDQLAR 397
            |:....:....|:..||     .|...::...|..|.......:.|..:.....:....:|    
Zfish   355 HVAFGPVIDGDLIPDDPEVLMEQGEFLNYDIMLGVNQGEGFRFVEGVVEPEEGGVSGSDFD---- 415

  Fly   398 LQSRNVSDYIDVV---------LRHTAPPSEHRLWKQWALRE-----------IFTPIQEQTASL 442
               ..|||::|.:         ||.|.    ..::..||.|:           :||       ..
Zfish   416 ---FTVSDFVDSLYGYPEGKDTLRETI----KFMYTDWADRDNPETRRKTLVAMFT-------DH 466

  Fly   443 QTVAPGLLELSNYILYRAPVINSISQSYRSVPAYLYTFDYRGEHHRFGHLSNPL-PFGVDASLSD 506
            |.|.|.::....:..|.:             |.:.|.|        :.|..:|: |...|::..|
Zfish   467 QWVEPAVVTADLHARYGS-------------PTFFYAF--------YHHCQSPMKPPWADSAHGD 510

  Fly   507 DSVYLFPYP---PEASRLNPL-----DRSLSRALVTMWVNFATTGVPNPSSGVWPQATSEYGPFL 563
            :..|:|..|   |  :.|.|.     |..||..::|.|.|||.||.||...   ||.|       
Zfish   511 ELPYVFGVPLIGP--TELFPCNFSRNDIMLSAVVMTYWTNFAKTGDPNKPV---PQDT------- 563

  Fly   564 RFTNNQQSPLE------LDPHFGEGIYL-----PNYRVIYKPTT------------NFSPPITTT 605
            :|.:.:.:..|      ..||  :.:||     |..|..|:.|.            |.......|
Zfish   564 KFIHTKANRFEEVTWAKYGPH--DQLYLHIGLKPRVRDHYRATKVAFWKHLVPHLYNLHDMFHYT 626

  Fly   606 TTTTTT----TTTTSRPYAYNPYANWQNRPSQQHP 636
            :|||..    ||.:|......|..|......:|.|
Zfish   627 STTTRVPPLLTTHSSHSATPRPGGNKARTSGKQPP 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GltNP_001245946.1 COesterase 55..579 CDD:278561 142/605 (23%)
Aes <146..345 CDD:223730 60/231 (26%)
RILP-like <677..>717 CDD:304877
nlgn3bXP_005165239.1 COesterase 40..609 CDD:278561 149/631 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575301
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.