DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glt and cel.2

DIOPT Version :10

Sequence 1:NP_477504.1 Gene:Glt / 34193 FlyBaseID:FBgn0001114 Length:1026 Species:Drosophila melanogaster
Sequence 2:NP_001020344.2 Gene:cel.2 / 565117 ZFINID:ZDB-GENE-061110-10 Length:551 Species:Danio rerio


Alignment Length:591 Identity:141/591 - (23%)
Similarity:242/591 - (40%) Gaps:132/591 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 EVGQILGISGHKTIANRPVNAFLGIRYGTVGGGLARFQAAQPI---GYQGRVNATVQSPNCAQFP 127
            |.|.:.|.| |.....|.::.|.||.:....|.|.:     |:   |::|.:.||..|..|.|  
Zfish    29 EGGMVQGKS-HSVGLLRYMDVFKGIPFAAPPGRLQK-----PVPHPGWEGVLKATEYSKRCIQ-- 85

  Fly   128 ELDRLRLSESRGENVDDCLTLDIYAPEG---ANQLPVLVFVHGEMLFDGGSEEAQ--PDYVLEKD 187
                |.|.::.....:|||.|:|:.|:|   :..|||:||::|.....||.:.|.  .:|:.:.:
Zfish    86 ----LNLLQTDTMGSEDCLYLNIWVPQGKTVSYNLPVMVFIYGGGFLLGGGQGANFLDNYLYDGE 146

  Fly   188 -------VLLVSINYRLAPFGFLSALTDELPGNVALSDLQLALEWLQRNVVHFGGNAGQVTLVGQ 245
                   |::|:.|||:...||||....:.|||..|.|...|:.|:.||:..||||...:|:.|:
Zfish   147 EIADRGNVIVVTFNYRVGSMGFLSTGDADAPGNYGLWDQHAAISWVHRNIKAFGGNPDNITIFGE 211

  Fly   246 AGGATLAHALSLSGRAGNLFQQLILQSGTALNPYLIDNQPLDTLSTFARLARCPPPSINPSAQGL 310
            :.|:|..:...:|.:...|.::.|.|||.||.|:.|:..|.......|:...||..|        
Zfish   212 SAGSTSVNFQIISPKNKGLIRRAISQSGVALCPWAINRNPRKFAEEIAKKVGCPTDS-------- 268

  Fly   311 KPLYDCLARLPTS--------QLVAAFEQLLLQNEHLGLTQLGGFKLVVGDPLGFLPSHPASLAT 367
             .:..||.|....        :|..:..:.::.|.:|.       .::.||   |:|..|.:|..
Zfish   269 -GMVACLRRTDPKAVTLAGKVRLATSATEPIVHNLYLS-------PVIDGD---FIPDEPDTLFG 322

  Fly   368 N------------------SSLALPMIIGATKDASAFIVSRIYDQLA--RLQSRNVSDYIDVVLR 412
            |                  ::|.:|.|..|....:...|..:...|:  |.|...::.:.:..:.
Zfish   323 NAADIDYIAGVNDMDGHIFATLDIPSINNALATTTEEEVQALATALSKDRGQDAGIATFQEYTVN 387

  Fly   413 HTAPPSEHRLWKQWALREIFTPIQEQTASLQTVAPGLLELSNYILYRAPVINSI---SQSYRSVP 474
            ..:.|::..:.|.                       ::|:....::..|...::   |.:.:|..
Zfish   388 WGSKPNKEDIKKT-----------------------VVEMETDYIFLVPTQTALYLHSDNAKSAR 429

  Fly   475 AYLYTFDYRGEHHRFGHLSNPL-PFGVDASLSDDSVYLF--PYPPEASRLNPLDRSLSRALVTMW 536
            .|.|.|   .|..|.     |: |..:.|..:|:..|:|  |:....... |..|.:|:.::..|
Zfish   430 TYSYLF---SESSRI-----PIFPLWMGADHADELQYVFGKPFTTPLGYF-PRHRDVSKYMIAYW 485

  Fly   537 VNFATTGVPNPSSG------VWPQATSEYGPFLRFTN--NQQSPLELDPHFGEGIYLPNYRVIYK 593
            .|||.||  ||::|      .||:.::....:|...|  |..|..:          :...|::|.
Zfish   486 TNFAQTG--NPNTGESKVPVTWPEFSNPGHQYLDINNKINTNSVKK----------MLRTRLVYY 538

  Fly   594 PTTNFS 599
            .||.|:
Zfish   539 WTTVFA 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GltNP_477504.1 COesterase 58..579 CDD:395084 136/569 (24%)
Casc1_N 681..>717 CDD:464947
cel.2NP_001020344.2 COesterase 26..539 CDD:395084 138/584 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.