DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glt and Gli

DIOPT Version :9

Sequence 1:NP_001245946.1 Gene:Glt / 34193 FlyBaseID:FBgn0001114 Length:1026 Species:Drosophila melanogaster
Sequence 2:NP_476602.1 Gene:Gli / 34927 FlyBaseID:FBgn0001987 Length:956 Species:Drosophila melanogaster


Alignment Length:996 Identity:199/996 - (19%)
Similarity:325/996 - (32%) Gaps:352/996 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLLVLALC-----------------GAQVHAHSVGLRPDYNDYSDEDTR---------------- 35
            ||:::..|                 |...|..:.| .|||..|:..|.|                
  Fly    17 LLVLIGTCFIQTRGQTRDPRFYSRPGVDYHWPNPG-DPDYRTYTFNDRRYGHYQPNGYGANYPGR 80

  Fly    36 ------RDWLP-------EPLKP----------VPWQSETRYAQPQEAVVQAPEV------GQIL 71
                  ...:|       :|..|          ..|:.:.:..|.::::....:|      ||:.
  Fly    81 NPPGQYPQGMPNEDRFRFDPNDPNARTQFPGVLAGWREDLQGKQRRDSLTLERDVFVTTNYGQVQ 145

  Fly    72 GIS---------------GHKTIANRPV---NAFLGIRYG------------TVGGGLARFQAA- 105
            |..               .|.|: :|.:   :.||||.|.            .|..|....||. 
  Fly   146 GFKVYMYDNPDPKSFYRPYHSTV-DRVMGECSVFLGIPYALPPTFEGRFKPPRVHRGWQLLQAVD 209

  Fly   106 ------QPIGYQGRVNATVQSPNCAQFPELDRLRLSESRGENVDDCLTLDIYAPEG----ANQLP 160
                  ||:.|.|.....:         ::|            :|||.|::|:|:.    |.:.|
  Fly   210 FGPACPQPVRYTGATKGIM---------DMD------------EDCLYLNVYSPKTGAGVAQKYP 253

  Fly   161 VLVFVHGEMLFDGGSEEAQPDYVLEK--DVLLVSINYRLAPFGFLSALTDELPGNVALSDLQLAL 223
            |:|::||.....|.|...| .::|..  ||::|::||||...||||...:..|||..:.|..:||
  Fly   254 VMVYIHGGEFIRGASNLFQ-GHILASFYDVVVVTLNYRLGALGFLSTGDENSPGNYGILDQAMAL 317

  Fly   224 EWLQRNVVHFGGNAGQVTLVGQAGGATLAHALSLSGRAGNLFQQLILQSGTALNPY-LIDN--QP 285
            .|:..|:..|.|:...:||.|...|...|..|.::.:..|:.:::|.|||:||..: ||.:  :.
  Fly   318 RWVYDNIEFFNGDRNSITLFGPGAGGASAGLLMVAPQTRNIVRRVIAQSGSALADWALIQDKYRA 382

  Fly   286 LDTLSTFARLARCPPPSINPSAQGLKPLYDCLARLPTSQLVAAFEQLLLQNEHLGLTQLGGFKLV 350
            .:|.....:|..|   ||..|.:    |.:||      :...:|.:  |.|.... .|:|.|   
  Fly   383 QNTSRVLGQLLGC---SIESSWK----LVNCL------RTGRSFYE--LGNAEFS-PQVGSF--- 428

  Fly   351 VGDPLG------------------------FLPSHPASL--ATNSSLALPMIIGATKDASAFIVS 389
               |.|                        ||...|.:|  |...:..:..:.|.|...:||.|:
  Fly   429 ---PWGPVLDHNFTLPGDDWYEGWREKDWRFLTQTPETLIRAGKFNRNIQYMTGVTTQEAAFFVA 490

  Fly   390 -------------RIYDQLAR---------LQSRNVSDYIDVVLRHTAPPSEHRLWKQWALREIF 432
                         |.:||..|         |....|.:.|..:......|:.:            
  Fly   491 QNESLSPYYELDGRFFDQKIREHVFRYNYTLNPNGVYEAIKYIYTFWPDPNNN------------ 543

  Fly   433 TPIQEQTASLQTVAPGLLELSNYILYRAPVINSIS-QSYRSVPAYLYTFD-------------YR 483
            |.|::|..::         ||: :.|||||...:. ...:.||.|:|..:             |.
  Fly   544 TIIRDQYINM---------LSD-LYYRAPVDQMVKLMLEQKVPVYMYVLNTTVEALNLPQWRKYP 598

  Fly   484 GEHHRFGHLSNPLPFGVDASLSDDSVYLFPYPPEASR--LNPLDRSLSRALVTMWVNFATTGVPN 546
            .:..|:        |...|...|..  .||......|  ....||::|...:..:.|||..|.|.
  Fly   599 HDIERY--------FLTGAPFMDTE--FFPKKEHLQRNMWTDNDRNMSHFFMQTYTNFARYGNPT 653

  Fly   547 PSSGVWPQATSEYGPFLRFTNNQQSPLELDPHFGEGIYLPNYRVIYKPT-----TNFSPPITTTT 606
            |...:.......|...:|:.|       ::..:...|.| |||    .|     |.:.|.:....
  Fly   654 PQQVLGMHFQRAYQGEIRYLN-------INTTYNSSILL-NYR----QTECAFWTQYLPTVIGVL 706

  Fly   607 TTTTTTTTTSRPYAYNPYANWQNRPSQQHPNWHPADPEYVRAQEARQQEF----------IRERE 661
            ..|...||          ..|          |.|.:|..:.........|          |..|.
  Fly   707 VPTYPPTT----------EYW----------WEPKEPLQIAFWSMSVACFFLIVLVVICCIMWRN 751

  Fly   662 QRRREQQLRDQQRY-------PQQEPRE-------------QQDERIRQQREQEE---------- 696
            .:|:..:..|:..:       |:|:.|.             :..:.|.:.|:...          
  Fly   752 AKRQSDRFYDEDVFINGEGLEPEQDTRGVDNAHMVTNHHALRSRDNIYEYRDSPSTKTLASKAHT 816

  Fly   697 -----------RLRQQREQEERLRQQRELEE---RIRQQQEREQYEREQQE-----------REQ 736
                       .:.|:...:..|:....|:|   .:.:|.||....|.||.           .|:
  Fly   817 DTTSLRSPSSLAMTQKSSSQASLKSGISLKETNGHLVKQSERAATPRSQQNGSTAKVASPPVEEK 881

  Fly   737 REREELERQQREREQQQPEQQ 757
            |..:.|......:.|.:|.::
  Fly   882 RLLQPLSSTPVTQLQAEPAKR 902

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GltNP_001245946.1 COesterase 55..579 CDD:278561 143/639 (22%)
Aes <146..345 CDD:223730 63/207 (30%)
RILP-like <677..>717 CDD:304877 8/76 (11%)
GliNP_476602.1 COesterase 134..695 CDD:278561 148/649 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440422
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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