DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glt and CG3841

DIOPT Version :9

Sequence 1:NP_001245946.1 Gene:Glt / 34193 FlyBaseID:FBgn0001114 Length:1026 Species:Drosophila melanogaster
Sequence 2:NP_001188759.1 Gene:CG3841 / 34278 FlyBaseID:FBgn0032131 Length:564 Species:Drosophila melanogaster


Alignment Length:530 Identity:155/530 - (29%)
Similarity:242/530 - (45%) Gaps:101/530 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 VGQILGISGHKTIANRPVNAFLGIRYGTVGGGLARFQAAQPI---GYQGRV-NATVQSPNCAQFP 127
            :|:|.| ...::..|:.:.||.||||.....|..||  |.|:   .:...| |||..|..|.| |
  Fly    35 LGRIQG-DTMQSFGNKTIYAFRGIRYAQSPVGQLRF--ANPVPETSWGDEVFNATSDSLVCPQ-P 95

  Fly   128 ELDRLRLSESRGENVDDCLTLDIYAPEGANQLPVLVFVHG--EMLFDG-GSEEAQPDYVLEKDVL 189
            .:..| :||       |||.::::.....::.||:|::||  .:|..| .|.||.|.|:|::||:
  Fly    96 GVVSL-MSE-------DCLKINVFTKSFEDKFPVMVYIHGGANVLGSGHSSYEAGPQYLLDQDVV 152

  Fly   190 LVSINYRLAPFGFLSALTDELPGNVALSDLQLALEWLQRNVVHFGGNAGQVTLVGQAGGATLAHA 254
            .|:.||||...||||..:.|..||....|..:||||::.::.||||:...||::|.:.| ::|.:
  Fly   153 FVAFNYRLGALGFLSTNSSETKGNFGFLDQVMALEWVRDHISHFGGDPELVTIIGISAG-SMAVS 216

  Fly   255 LSL-SGRAGNLFQQLILQSGTALNPYLIDNQPLDTLSTFARLAR---CPPPSINPSAQGLKPLYD 315
            |.| |..:..||.:.||.||:|.|.:.|||     |....:|||   |             |:||
  Fly   217 LHLASPLSAGLFHRAILMSGSATNHFDIDN-----LFWTRKLARELGC-------------PMYD 263

  Fly   316 ------CLARLPTSQLV---AAFEQLLLQNEHLGLTQLGGFKLVVGDPLGFLPSHPASLATNSSL 371
                  ||.....:::|   .|:|...|.|..... ::.|.         ||.:||..|....:.
  Fly   264 PTDVVECLRNETWTRIVEVCKAWETYQLVNMKWNY-EIDGH---------FLHNHPTELIKEGNF 318

  Fly   372 -ALPMIIGATKDASAFIVSRIYDQLARLQSRNV-----SDYID-----VVLRHTAPPSEHRLWKQ 425
             .:|::|..|  |:.|    .|:....|:::::     |:::|     .:.||.|...|.  .|.
  Fly   319 NKVPLLISFT--ANEF----DYNANVHLENQHLLHDFASNFVDYAPELFLYRHDAQIGEK--LKD 375

  Fly   426 WALREIFTPIQEQTASLQTVAPGLLELSNYILYRAPVINSISQSYRSVPAYLYTFDYRGEHHRFG 490
            :.|.:..|.|..:  :::..  |.:....||.:....:..::..:  .|.|....||.|:.    
  Fly   376 FYLGDNTTEINSE--NIENF--GQIFSDAYIGHGVHRLVQLASHF--TPVYYTRMDYVGDQ---- 430

  Fly   491 HLSNPL-----PFGVDASLSDDSVYLFP---YPPEASRLNPLDRSLSRALVTMWVNFATTGVPNP 547
            .||.||     |.||  ..:||..|:.|   |.| ....|..|..:...|.:.:.:||.||.|..
  Fly   431 SLSAPLNGENKPVGV--GHADDLHYVLPGYWYGP-LMAANDSDVFMMERLTSWFTHFAKTGTPLN 492

  Fly   548 SSGVWPQATS 557
            |:.:||...|
  Fly   493 STDIWPPCNS 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GltNP_001245946.1 COesterase 55..579 CDD:278561 155/530 (29%)
Aes <146..345 CDD:223730 71/214 (33%)
RILP-like <677..>717 CDD:304877
CG3841NP_001188759.1 COesterase 27..528 CDD:278561 155/530 (29%)
Aes <116..>235 CDD:223730 48/119 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467426
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR43142
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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