DRSC/TRiP Functional Genomics Resources

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Protein Alignment Glt and Nlgn1

DIOPT Version :10

Sequence 1:NP_477504.1 Gene:Glt / 34193 FlyBaseID:FBgn0001114 Length:1026 Species:Drosophila melanogaster
Sequence 2:XP_006535478.1 Gene:Nlgn1 / 192167 MGIID:2179435 Length:863 Species:Mus musculus


Alignment Length:704 Identity:180/704 - (25%)
Similarity:265/704 - (37%) Gaps:199/704 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 GQILGISGHKTIANR---PVNAFLGIRYGTVGGGLARFQAAQPIGYQGRV-NATVQSPNCAQ--- 125
            |:|.||.  |.:.|.   ||..|||:.|.....|..|||..:|......: |||..:|.|.|   
Mouse    60 GKIRGIK--KELNNEILGPVIQFLGVPYAAPPTGEHRFQPPEPPSPWSDIRNATQFAPVCPQNII 122

  Fly   126 ---FPE----------LDRLRLSESRGENVDDCLTLDIYAP------------------------ 153
               .||          ||  .:|....:..:|||.|:||.|                        
Mouse   123 DGRLPEVMLPVWFTNNLD--VVSSYVQDQSEDCLYLNIYVPTEDVKRISKECARKPGKKICRKGG 185

  Fly   154 -------------EGANQ---------LPVLVFVHGEM-------LFDGGSEEAQPDYVLEK--D 187
                         :||..         .||:|::||..       |:||.        ||..  :
Mouse   186 PLTKKHTDDLGDNDGAEDEDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGS--------VLASYGN 242

  Fly   188 VLLVSINYRLAPFGFLSALTDELPGNVALSDLQLALEWLQRNVVHFGGNAGQVTLVGQAGGATLA 252
            |:::::||||...||||.......||..|.||..||.|...|:..|||:..::|:.|...|.:..
Mouse   243 VIVITVNYRLGVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCV 307

  Fly   253 HALSLSGRA-GN--------LFQQLILQSGTALNPYLIDNQPLDTLSTFARLARCPPPSINPSAQ 308
            :.|:||..: ||        |||:.|.||||||:.:.:..||       |:.||.....:..:..
Mouse   308 NLLTLSHYSEGNRWSNSTKGLFQRAIAQSGTALSSWAVSFQP-------AKYARILATKVGCNVS 365

  Fly   309 GLKPLYDCLARLPTSQLVAAFEQLLLQNEHLGLTQLGGFKLVVGDPLGFLPSHPASLATNSS-LA 372
            ....|.:||.:.|       :::|:.|:.......:....::.||   .:|..|..|..... |.
Mouse   366 DTVELVECLQKKP-------YKELVDQDVQPARYHIAFGPVIDGD---VIPDDPQILMEQGEFLN 420

  Fly   373 LPMIIGATKDASAFIVSRIYDQLARLQSRN----VSDYID---------VVLRHTAPPSEHRLWK 424
            ..:::|..:......|..|.|....:.:.:    ||:::|         .|||.|.    ..::.
Mouse   421 YDIMLGVNQGEGLKFVENIVDSDDGVSASDFDFAVSNFVDNLYGYPEGKDVLRETI----KFMYT 481

  Fly   425 QWALREIFTPIQEQTASLQTVAPGLLELSNYILYRAPVINS--ISQSYRSVPAYLYTFDYRGEHH 487
            .||.|.          :.:|....||.|.....:.||.:.:  :..::.| |.|.|.|    .||
Mouse   482 DWADRH----------NPETRRKTLLALFTDHQWVAPAVATADLHSNFGS-PTYFYAF----YHH 531

  Fly   488 RFGHLSNPLPFGVDASLSDDSVYLFPYP---PEASRLNPL-----DRSLSRALVTMWVNFATTGV 544
               ..::.:|...||:..|:..|:...|   |  :.|.|.     |..||..::|.|.|||.||.
Mouse   532 ---CQTDQVPAWADAAHGDEVPYVLGIPMIGP--TELFPCNFSKNDVMLSAVVMTYWTNFAKTGD 591

  Fly   545 PNPSSGVWPQATS---------EYGPFLRFTNNQQSPLE--LDPHFGEGIYLPNYR--------- 589
            ||...   ||.|.         |...:.|::...|..|.  |.|...|     :||         
Mouse   592 PNQPV---PQDTKFIHTKPNRFEEVAWTRYSQKDQLYLHIGLKPRVKE-----HYRANKVNLWLE 648

  Fly   590 -VIYKPTTNFSPPITTTTTTTTTTTTTSRPYAYN--------PYANWQNRPSQQ 634
             |.:....|.....|:|||...:|..|.||...|        |.|. |:.|.||
Mouse   649 LVPHLHNLNDISQYTSTTTKVPSTDITLRPTRKNSTPVTSAFPTAK-QDDPKQQ 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GltNP_477504.1 COesterase 58..579 CDD:395084 160/629 (25%)
Casc1_N 681..>717 CDD:464947
Nlgn1XP_006535478.1 COesterase 52..646 CDD:395084 163/646 (25%)
Blue background indicates that the domain is not in the aligned region.

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