DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glt and cest-17

DIOPT Version :9

Sequence 1:NP_001245946.1 Gene:Glt / 34193 FlyBaseID:FBgn0001114 Length:1026 Species:Drosophila melanogaster
Sequence 2:NP_505114.1 Gene:cest-17 / 179198 WormBaseID:WBGene00019477 Length:571 Species:Caenorhabditis elegans


Alignment Length:588 Identity:153/588 - (26%)
Similarity:229/588 - (38%) Gaps:150/588 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 VQAPEV----GQILGISGHKTIANRPVNAFLGIRYGTVGGGLARFQAAQPIGYQGRVN--ATVQS 120
            |..|:|    |.|:|.....|:.....:.|||||||.....:.|||..:|:.....:|  ||...
 Worm    19 VSKPKVTTPYGPIVGFEHKSTVTGSKYHVFLGIRYGNPPDHIYRFQKPEPVEKWPHINHDATHFR 83

  Fly   121 PNCAQFPELDRLRLSESRGENVDDCLTLDIYAPEGANQ--LPVLVFVHGEMLFDG-----GSEEA 178
            .:|  .|.| |..|.|....: :|||.|:|..|..|.:  ||||||:||.....|     |.::|
 Worm    84 ASC--IPSL-RSELEEQVNYS-EDCLFLNIVTPPDAKEKKLPVLVFIHGGGFQFGDTSMIGYQKA 144

  Fly   179 QPDYVLEKDVLLVSINYRLAPFGFLSALTDELPGNVALSDLQLALEWLQRNVVHFGGNAGQVTLV 243
            ..::| .||::.|||.|||.|.||.:....|:|||:.|.|..|||::|...:..|||:..::||.
 Worm   145 ADNFV-SKDIIFVSIQYRLGPLGFFTTGDSEIPGNMGLWDQTLALQFLHEVLPDFGGDPDRITLA 208

  Fly   244 GQAGGATLAHALSLSGRAGNLFQQLILQSGTALNPYLIDNQPLDTLSTFARLARCPPPSINPSAQ 308
            |.:.||....||..|..:.:||.|.|..||:..:...:|...:|.....|:.|.||       .:
 Worm   209 GHSAGAASVSALLYSPHSDHLFSQAIQLSGSIFSESNLDRNVVDDSRKLAKAAGCP-------QE 266

  Fly   309 GLKPLYDCLARLPTSQLVAAFEQLLLQNEHLGLTQLGGFKLVVGDPLGFLPS------HP----- 362
            ..|.|.||:......:|:.|.|.                   :|:   .||.      ||     
 Worm   267 DSKELRDCIEIRTVDELLDAMES-------------------IGE---LLPGPRTKKFHPYFDKD 309

  Fly   363 ----------------------ASLATNSSLALPM----IIGATKDASAFIVSRIYDQLARLQSR 401
                                  .||.:..|:..|:    ::|..|::           .:.....
 Worm   310 FFPYDIEKMSRKAPKKRTMQGLVSLESGLSVLYPVKLAKLLGVPKES-----------WSTYSKD 363

  Fly   402 NVSDYIDVVLRHTAPPSEHRLWKQWALREIFTPIQEQTASLQTVAPGLLE--------LSNYILY 458
            |:.|:|.               .|.|:.:.|     .|||.:  ..||:|        ..|...|
 Worm   364 NLVDFIR---------------SQVAVEQEF-----GTASAR--FSGLVEEFYLSGPMTGNSSFY 406

  Fly   459 RAPVINSISQSYRSVP--------------AYLYTFDYRGEHHRFGHLSNPL--PFGVDASLSDD 507
            .....|.:|....::|              .|||..||..|..:  ..::|:  ||.     :.:
 Worm   407 LNAFANLLSDLQYNIPTLHEVELKLQHGWDTYLYIIDYDSETTK--DPTHPIKGPFH-----ASE 464

  Fly   508 SVYLFPY-PPEASRLNPLDRSLSRALVTMWVNFATTGVPNPSSGVWPQATSEYGPFLRFTNNQQS 571
            ..|||.: ..:....|..|:......|...|||..||.|:..:.:|| |.|:..||.....|.:.
 Worm   465 LRYLFNFNGMDTIPFNDKDKKFENYFVNAIVNFINTGTPSTKALLWP-AVSKSQPFANLLLNDKP 528

  Fly   572 PLE 574
            .::
 Worm   529 SVQ 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GltNP_001245946.1 COesterase 55..579 CDD:278561 153/588 (26%)
Aes <146..345 CDD:223730 68/205 (33%)
RILP-like <677..>717 CDD:304877
cest-17NP_505114.1 COesterase 20..542 CDD:278561 152/587 (26%)
Aes <109..>225 CDD:223730 47/116 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D206516at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.