DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Glt and cest-6

DIOPT Version :9

Sequence 1:NP_001245946.1 Gene:Glt / 34193 FlyBaseID:FBgn0001114 Length:1026 Species:Drosophila melanogaster
Sequence 2:NP_501070.1 Gene:cest-6 / 177459 WormBaseID:WBGene00020688 Length:583 Species:Caenorhabditis elegans


Alignment Length:611 Identity:135/611 - (22%)
Similarity:234/611 - (38%) Gaps:142/611 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 EAVVQAPEVGQILG--ISGHKTIANRPVNAFLGIRYGTVGGGLARFQ---AAQPIGYQGRVNATV 118
            ||.|....:|.|.|  |..::|        |..|.:.....|..|||   ||:.  ::|.:|||.
 Worm    22 EAGVITTSLGSINGNQIGSYQT--------FKKIPFAKPPIGKLRFQKPMAAEK--WEGILNATE 76

  Fly   119 QSPNCAQFPELDRLRLSESRGENVD-DCLTLDIYAPE---GANQLPVLVFVH-GEMLFDGG---S 175
            ..|.|     :.....|:|..:.:| |||.::|:..:   .:....|:.:|| ||:::|..   .
 Worm    77 YGPAC-----MSNSSTSKSPQKWIDEDCLHINIFTTDTCLSSKNCSVVFYVHGGELVYDSAVMFE 136

  Fly   176 EEAQPDYVLEKDVLLVSINYRLAPFG-FLSALTDELPGNVALSDLQLALEWLQRNVVHFGGNAGQ 239
            ::...|....:||:||...:||..|. |:....:..|.|:||.|:.||||:::..:.:|||::.:
 Worm   137 DKYLFDTFSSRDVILVIPAFRLGLFSHFVVEDQNVAPNNLALYDILLALEFVKSEIHNFGGSSDR 201

  Fly   240 VTLVGQAGGATLAHALSLSGRAG---NLFQQLILQSGTALNPYLIDNQPLDTLSTFARLARCPPP 301
            ||..|.:.|..:...::.|....   :.||::|..|  ::|.:......::....|.:.|.|..|
 Worm   202 VTAFGHSYGGHVVSVMAFSTEINTDLSYFQRVICMS--SVNVWDSLEFEIEKTMRFIQYANCSVP 264

  Fly   302 SINPSAQGLKP----------LYDCLARLPTSQLVAAFEQLLLQNEHLGLTQLGGFKLVVGDPL- 355
                  |.||.          :.:||..:.:.:|:..  |..|::|  |.....|  ||:.:|| 
 Worm   265 ------QDLKSRMTSFEQDSYMMECLQDIDSMELLRI--QRSLEDE--GHPIYSG--LVLREPLI 317

  Fly   356 -GFLPSHPASLATNSSLALPMIIGAT-KDASAF-IVSRIYDQLARLQSRNVSD-YIDVVLRHTAP 416
             ..|.........|    :|.:.|.| |:...| ....|.:.|.....:...| |.|        
 Worm   318 QNVLVQDFYEKPKN----IPTLTGCTYKELDKFHAYHNIVETLGYENYKECDDKYRD-------- 370

  Fly   417 PSEHRLWKQWALR----EIFTPIQEQTASLQTVAPGLLELSNYILYRAPVINSISQSYRSVPAYL 477
               .|.:.::.|.    |.|               |:|..:.        :....|..:.:|.|.
 Worm   371 ---DRKYGRFDLNKHADETF---------------GILAQTK--------LKVDKQLDKGIPTYF 409

  Fly   478 YTFDYRGEHHRFGHLSNPLPFGVDASLSDDSVYLFPYPPEASRLNPLDRSLSRALVTMWVNFATT 542
            |.:.|.........||..:  ||.|...|::                :..|:::...|::||...
 Worm   410 YEYSYPKHPSHTDDLSYIM--GVHAFEKDEN----------------EIHLAKSYQEMFMNFVKF 456

  Fly   543 GVPNPSSGVWPQATSEYGPFLRF----TNNQQSPLELDPHFGEGIYLPNYRVIYKPTTNFSPPIT 603
            |.|   .|.:..:|.|...:..|    |..::|.::  .:|.:.|    .:...|....:...||
 Worm   457 GEP---GGGFEMSTFENSSYFNFYWNETTGEKSSMK--TNFEKEI----IKYWLKDMFEYDQNIT 512

  Fly   604 TTTTTTTTTTTTSR--------PYAY 621
            .........|.:::        ||.|
 Worm   513 AAKQLKVAITRSAKFNVSEDQLPYLY 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GltNP_001245946.1 COesterase 55..579 CDD:278561 126/559 (23%)
Aes <146..345 CDD:223730 53/219 (24%)
RILP-like <677..>717 CDD:304877
cest-6NP_501070.1 Abhydrolase 25..500 CDD:389770 126/568 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156936
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.